Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48241 | Canola | cytosol | 100.0 | 100.0 |
| CDX83425 | Canola | cytosol | 100.0 | 100.0 |
| CDX95606 | Canola | cytosol | 100.0 | 100.0 |
| CDX74672 | Canola | cytosol | 99.52 | 99.52 |
| CDY30479 | Canola | cytosol | 99.04 | 99.04 |
| Bra000355.1-P | Field mustard | cytosol | 99.04 | 99.04 |
| Bra004850.1-P | Field mustard | cytosol | 99.04 | 99.04 |
| Bra037641.1-P | Field mustard | cytosol | 99.04 | 99.04 |
| TraesCS2B01G261200.1 | Wheat | cytosol | 92.79 | 92.79 |
| TraesCS2A01G236600.1 | Wheat | cytosol | 92.79 | 92.79 |
| Os07t0496000-01 | Rice | plasma membrane | 92.79 | 92.79 |
| HORVU2Hr1G050270.2 | Barley | cytosol | 92.79 | 92.79 |
| GSMUA_Achr5P12680_001 | Banana | plasma membrane | 92.79 | 92.79 |
| TraesCS2D01G234600.1 | Wheat | plastid | 92.79 | 92.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 92.31 | 92.31 |
| Zm00001d006433_P001 | Maize | plasma membrane | 91.83 | 91.83 |
| EER97251 | Sorghum | cytosol | 91.83 | 91.83 |
| GSMUA_Achr1P00610_001 | Banana | cytosol | 78.85 | 91.62 |
| AT5G10260.1 | Thale cress | cytosol | 87.5 | 87.92 |
| AT2G22290.1 | Thale cress | cytosol | 83.65 | 84.06 |
| AT4G39890.1 | Thale cress | cytosol | 79.33 | 77.1 |
| Zm00001d021551_P002 | Maize | cytosol | 92.31 | 75.59 |
| AT5G64990.2 | Thale cress | cytosol | 74.04 | 72.3 |
| AT3G54840.1 | Thale cress | cytosol | 39.42 | 40.59 |
| AT4G19640.1 | Thale cress | cytosol | 38.46 | 40.0 |
| AT5G45130.2 | Thale cress | endoplasmic reticulum | 37.98 | 37.98 |
| CDY23446 | Canola | cytosol | 98.56 | 34.11 |
| Zm00001d024612_P011 | Maize | mitochondrion | 40.38 | 29.17 |
Protein Annotations
| MapMan:22.8.1.8 | Gene3D:3.40.50.300 | EntrezGene:819069 | UniProt:A0A178W0B3 | ProteinID:AAC27463.1 | ProteinID:AEC10447.1 |
| EMBL:AK226988 | ArrayExpress:AT2G44610 | EnsemblPlantsGene:AT2G44610 | RefSeq:AT2G44610 | TAIR:AT2G44610 | RefSeq:AT2G44610-TAIR-G |
| EnsemblPlants:AT2G44610.1 | TAIR:AT2G44610.1 | EMBL:AY087904 | Unigene:At.24965 | EMBL:BT025780 | GO:GO:0000139 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006890 | GO:GO:0006891 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016192 | GO:GO:0016787 | GO:GO:0042147 | RefSeq:NP_181989.1 | UniProt:O80501 |
| ProteinID:OAP10935.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF840 |
| Symbol:RAB6 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000A0A3A | : | : |
Description
RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
Coordinates
chr2:-:18411424..18414153
Molecular Weight (calculated)
23131.7 Da
IEP (calculated)
8.164
GRAVY (calculated)
-0.138
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.