Factsheet for AT2G22290.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038535.1-P	Field mustard	cytosol	95.65	95.65
CDY13772	Canola	cytosol	95.65	95.65
KRH43179	Soybean	cytosol	90.82	90.82
KRG97576	Soybean	cytosol	90.34	90.34
KRH59334	Soybean	endoplasmic reticulum	89.86	89.86
AT5G10260.1	Thale cress	cytosol	89.37	89.37
KRH31293	Soybean	cytosol	76.81	89.33
PGSC0003DMT400056111	Potato	cytosol	88.89	88.89
Solyc03g078570.2.1	Tomato	cytosol	88.41	88.41
VIT_00s0665g00040.t01	Wine grape	extracellular	74.4	86.52
GSMUA_Achr6P10400_001	Banana	cytosol	86.47	86.47
EER97564	Sorghum	cytosol	86.96	86.12
Zm00001d006905_P001	Maize	mitochondrion	86.47	85.65
GSMUA_Achr2P22200_001	Banana	cytosol	85.51	85.51
AT4G39890.1	Thale cress	cytosol	86.96	84.11
AT2G44610.1	Thale cress	cytosol	84.06	83.65
Os03t0191400-01	Rice	plasma membrane	78.26	75.35
KXG39985	Sorghum	cytosol	76.33	74.18
AT5G64990.2	Thale cress	cytosol	75.36	73.24
TraesCS4D01G305100.1	Wheat	cytosol	74.88	72.43
TraesCS4A01G407500.1	Wheat	cytosol	74.4	71.96
TraesCS4B01G306900.1	Wheat	cytosol	73.91	71.5
CDX76936	Canola	cytosol	86.96	65.45
Zm00001d028012_P001	Maize	cytosol, extracellular	64.73	60.36
HORVU4Hr1G078690.2	Barley	plastid	74.4	50.16
AT3G54840.1	Thale cress	cytosol	38.16	39.11
AT4G19640.1	Thale cress	cytosol	37.2	38.5
AT5G45130.2	Thale cress	endoplasmic reticulum	35.75	35.58

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	EntrezGene:816761	UniProt:A0A178VS36	ProteinID:AAD23614.1	ProteinID:AEC07288.1
ArrayExpress:AT2G22290	EnsemblPlantsGene:AT2G22290	RefSeq:AT2G22290	TAIR:AT2G22290	RefSeq:AT2G22290-TAIR-G	EnsemblPlants:AT2G22290.1
TAIR:AT2G22290.1	Symbol:ATRABH1D	GO:GO:0000139	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005794	GO:GO:0005829	GO:GO:0006810	GO:GO:0006890
GO:GO:0006891	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0016787
GO:GO:0042147	RefSeq:NP_179816.1	ProteinID:OAP07652.1	InterPro:P-loop_NTPase	PFAM:PF00071	PO:PO:0001016
PO:PO:0001017	PO:PO:0007616	PO:PO:0009046	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF475	UniProt:Q9SID8	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI00000A26D3	SEG:seg	:	:	:	:

Description

RABH1DRas-related protein RABH1d [Source:UniProtKB/Swiss-Prot;Acc:Q9SID8]

Coordinates

chr2:+:9466389..9467948

Molecular Weight (calculated)

23113.6 Da

IEP (calculated)

6.722

GRAVY (calculated)

-0.260

Length

207 amino acids

Sequence
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVVVYD VANRLSFLNT
101: SKWIEEVRNE RAGDVIIVLV GNKTDLVEKR QVSIEEGDSK GREYGVMFIE TSAKAGFNIK PLFRKIAAAL PGMESYSNTK NEDMVDVNLK PTSNSSQGDQ
201: QGGACSC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.