Factsheet for HORVU4Hr1G078690.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G305100.1	Wheat	cytosol	68.08	97.66
TraesCS4B01G306900.1	Wheat	cytosol	67.75	97.2
TraesCS4A01G407500.1	Wheat	cytosol	67.43	96.73
Os03t0191400-01	Rice	plasma membrane	60.59	86.51
KXG39985	Sorghum	cytosol	59.61	85.92
GSMUA_Achr2P22200_001	Banana	cytosol	54.4	80.68
HORVU2Hr1G050270.2	Barley	cytosol	54.4	80.29
KRH59334	Soybean	endoplasmic reticulum	52.77	78.26
PGSC0003DMT400056111	Potato	cytosol	52.44	77.78
PGSC0003DMT400018619	Potato	cytosol	52.44	77.78
KRH43179	Soybean	cytosol	52.44	77.78
Solyc03g078570.2.1	Tomato	cytosol	52.44	77.78
Solyc05g051570.2.1	Tomato	nucleus	52.44	77.78
GSMUA_Achr6P10400_001	Banana	cytosol	52.44	77.78
KRG97576	Soybean	cytosol	52.12	77.29
AT5G10260.1	Thale cress	cytosol	52.12	77.29
KRH31293	Soybean	cytosol	44.3	76.4
CDX96987	Canola	cytosol	51.14	76.21
CDX69850	Canola	cytosol	51.14	76.21
Bra009046.1-P	Field mustard	cytosol	51.14	76.21
CDY13772	Canola	cytosol	51.14	75.85
CDX81166	Canola	cytosol	51.14	75.85
CDX78373	Canola	cytosol	51.14	75.85
Bra038535.1-P	Field mustard	cytosol	51.14	75.85
Bra006054.1-P	Field mustard	cytosol	51.14	75.85
VIT_00s0665g00040.t01	Wine grape	extracellular	43.97	75.84
AT2G22290.1	Thale cress	cytosol	50.16	74.4
Zm00001d028012_P001	Maize	cytosol, extracellular	51.14	70.72
CDX76936	Canola	cytosol	49.84	55.64
HORVU5Hr1G002970.1	Barley	plastid	24.76	36.36
HORVU1Hr1G013720.3	Barley	cytosol, mitochondrion, nucleus	23.13	34.98
HORVU2Hr1G027490.2	Barley	cytosol, mitochondrion, nucleus	21.17	34.57
HORVU7Hr1G101140.7	Barley	mitochondrion	23.13	32.72
HORVU4Hr1G002980.2	Barley	cytosol	25.08	32.22
HORVU4Hr1G072020.1	Barley	cytosol	24.76	29.23

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:HORVU4Hr1G078690	EnsemblPlants:HORVU4Hr1G078690.2	UniProt:M0ULT7
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF840
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002947F97	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:-:608378217..608380902

Molecular Weight (calculated)

33284.6 Da

IEP (calculated)

7.448

GRAVY (calculated)

-0.269

Length

307 amino acids

Sequence
(BLAST)

001: MYVCICMDVP STHATRQLAS ETSKVASPSP LKAKQSKPPP APPSSVPFPP VARVQTPGNY SRSSTRLDDP IQINHAPNRP IDPSISSIRA EDQMAPVVSA
101: LAKYKLVFLG DQAVGKTAII TRFMYDKFDA TYQATIGIDF LSKTMYLEDR TVRLQLWDTA GQERFRSLIP SYIRDSSVAV IVYDVTDTQS FLHTSKWIDE
201: VNTARGKDVL IVLVGNKTDL VDQRQVPTDE GEAKAKEHGA LFMETSAKAG FNIKALFRTI AASLPGMDAV SSAKQEDMVD INLRPASGPA GSGTAGQQEE
301: KAGGCSC

Best Arabidopsis Sequence Match ( AT2G44610.1 )
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC

Arabidopsis Description

RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.