Factsheet for GSMUA_Achr6P10400_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 4
mitochondrion 2
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P22200_001	Banana	cytosol	94.2	94.2
KRH43179	Soybean	cytosol	90.34	90.34
KRH59334	Soybean	endoplasmic reticulum	90.34	90.34
KRH31293	Soybean	cytosol	77.29	89.89
PGSC0003DMT400018619	Potato	cytosol	89.86	89.86
PGSC0003DMT400056111	Potato	cytosol	89.86	89.86
Solyc03g078570.2.1	Tomato	cytosol	89.86	89.86
Solyc05g051570.2.1	Tomato	nucleus	89.37	89.37
KRG97576	Soybean	cytosol	88.89	88.89
VIT_00s0665g00040.t01	Wine grape	extracellular	76.33	88.76
Zm00001d006905_P001	Maize	mitochondrion	89.37	88.52
GSMUA_Achr5P12680_001	Banana	plasma membrane	88.41	87.98
EER97564	Sorghum	cytosol	88.41	87.56
AT5G10260.1	Thale cress	cytosol	87.44	87.44
GSMUA_Achr1P00610_001	Banana	cytosol	74.88	86.59
GSMUA_AchrUn_...	Banana	cytosol	86.96	86.54
AT2G22290.1	Thale cress	cytosol	86.47	86.47
CDY13772	Canola	cytosol	85.99	85.99
Bra038535.1-P	Field mustard	cytosol	85.99	85.99
Bra006054.1-P	Field mustard	cytosol	85.51	85.51
CDX81166	Canola	cytosol	85.51	85.51
CDX78373	Canola	cytosol	85.51	85.51
CDX96987	Canola	cytosol	85.02	85.44
CDX69850	Canola	cytosol	84.06	84.47
Bra009046.1-P	Field mustard	cytosol	84.06	84.47
Os03t0191400-01	Rice	plasma membrane	82.13	79.07
KXG39985	Sorghum	cytosol	80.19	77.93
TraesCS4D01G305100.1	Wheat	cytosol	78.74	76.17
TraesCS4B01G306900.1	Wheat	cytosol	78.26	75.7
TraesCS4A01G407500.1	Wheat	cytosol	77.78	75.23
Zm00001d028012_P001	Maize	cytosol, extracellular	67.63	63.06
CDX76936	Canola	cytosol	80.68	60.73
HORVU4Hr1G078690.2	Barley	plastid	77.78	52.44
GSMUA_Achr1P03160_001	Banana	cytosol	36.23	42.61
GSMUA_AchrUn_...	Banana	cytosol	28.02	40.28
GSMUA_Achr7P16440_001	Banana	cytosol	38.65	39.6
GSMUA_Achr6P02970_001	Banana	cytosol	38.16	39.5
GSMUA_Achr9P10010_001	Banana	cytosol	36.72	37.07
GSMUA_Achr6P31600_001	Banana	cytosol	36.23	36.76
GSMUA_Achr5P10670_001	Banana	cytosol	32.85	35.23
GSMUA_Achr4P29310_001	Banana	plastid	37.2	35.16
GSMUA_Achr1P02060_001	Banana	cytosol	39.13	33.89
GSMUA_Achr4P29680_001	Banana	cytosol	38.16	33.76
GSMUA_Achr2P10990_001	Banana	cytosol	38.16	32.78
GSMUA_Achr5P23540_001	Banana	endoplasmic reticulum	36.72	32.76
GSMUA_Achr11P...	Banana	mitochondrion	30.92	30.92
GSMUA_AchrUn_...	Banana	cytosol	13.53	30.11
GSMUA_Achr6P32620_001	Banana	mitochondrion	27.54	29.69

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G10400_001	EnsemblPlants:GSMUA_Achr6P10400_001	EnsemblPlants:GSMUA_Achr6T10400_001
UniProt:M0T5T9	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF630	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00029658D9	SEG:seg	:

Description

Ras-related protein RABH1B [Source:GMGC_GENE;Acc:GSMUA_Achr6G10400_001]

Coordinates

chr6:+:6965304..6970743

Molecular Weight (calculated)

23118.6 Da

IEP (calculated)

8.164

GRAVY (calculated)

-0.216

Length

207 amino acids

Sequence
(BLAST)

001: MAVVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIAYD VSNRQSFLNT
101: SKWIEEVRTE RGGDVIIVLV GNKTDLVEKR QVSTEDGETK SREFGVMFIE TSAKAGFNIK PLFRKIAASL PGMETLASTK QEDMVDVNLK STVSSTQTQQ
201: QSGGCSC

Best Arabidopsis Sequence Match ( AT5G10260.1 )
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VANRQSFLNT
101: SKWIEDVRTE RGSDVIIVLV GNKTDLVDKR QVSIEEGDNK ARDYGVIFIE TSAKAGFNIK PLFRKIAAAL PGMETLSSTK QEDMVDVNLK TSSNSAQGEQ
201: QRGGCAC

Arabidopsis Description

RABH1ERABH1e [Source:UniProtKB/TrEMBL;Acc:A0A178UPG4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.