Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d036973_P001 | Maize | cytosol | 40.86 | 55.07 |
| Zm00001d010555_P001 | Maize | cytosol | 33.33 | 31.0 |
| GSMUA_Achr9P10010_001 | Banana | cytosol | 54.84 | 24.88 |
| GSMUA_Achr2P10990_001 | Banana | cytosol | 62.37 | 24.07 |
| GSMUA_Achr1P02060_001 | Banana | cytosol | 61.29 | 23.85 |
| GSMUA_Achr4P29680_001 | Banana | cytosol | 59.14 | 23.5 |
| GSMUA_Achr7P16440_001 | Banana | cytosol | 49.46 | 22.77 |
| GSMUA_Achr6P31600_001 | Banana | cytosol | 49.46 | 22.55 |
| GSMUA_Achr6P02970_001 | Banana | cytosol | 40.86 | 19.0 |
| GSMUA_Achr1P03160_001 | Banana | cytosol | 32.26 | 17.05 |
| GSMUA_Achr5P23540_001 | Banana | endoplasmic reticulum | 38.71 | 15.52 |
| GSMUA_Achr1P00610_001 | Banana | cytosol | 29.03 | 15.08 |
| GSMUA_Achr2P22200_001 | Banana | cytosol | 33.33 | 14.98 |
| GSMUA_Achr6P32620_001 | Banana | mitochondrion | 30.11 | 14.58 |
| GSMUA_Achr5P12680_001 | Banana | plasma membrane | 31.18 | 13.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.18 | 13.94 |
| GSMUA_Achr6P10400_001 | Banana | cytosol | 30.11 | 13.53 |
| GSMUA_Achr4P29310_001 | Banana | plastid | 30.11 | 12.79 |
| GSMUA_Achr11P... | Banana | mitochondrion | 27.96 | 12.56 |
| GSMUA_Achr5P10670_001 | Banana | cytosol | 25.81 | 12.44 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.45 | 4.17 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP08150_001 | EnsemblPlants:GSMUA_AchrUn_randomT08150_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG08150_001 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase |
| InterPro:Small_GTPase | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF622 | PFAM:PF00071 | SUPFAM:SSF52540 | UniParc:UPI00029658D2 |
| UniProt:M0U7C6 | MapMan:35.1 | : | : | : | : |
Description
Ras-related protein Rab5 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08150_001]
Coordinates
chrchrUn_random:-:34941294..34943143
Molecular Weight (calculated)
10581.6 Da
IEP (calculated)
8.738
GRAVY (calculated)
-0.522
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MLTKYMHRNL QPNTKIGWNL EIPTWIKNVE ARTYAEENGL FFLETSAKTA INVNDIFYEI ARRLPRAQPA QQPAGIDLAN RPAERSQASS CCS
001: MAAAGNKSIN AKLVLLGDVG AGKSSLVLRF VKDQFVEFQE STIGAAFFSQ TLAVNDATVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVF DVTNQASFER
101: AKKWVQELQA QGNPNMVMAL AGNKSDLLDA RKVTAEDAQT YAQENGLFFM ETSAKTATNV KEIFYEIARR LPRVQPTENP TGMVLPDRAM DRAVSSSCCA
101: AKKWVQELQA QGNPNMVMAL AGNKSDLLDA RKVTAEDAQT YAQENGLFFM ETSAKTATNV KEIFYEIARR LPRVQPTENP TGMVLPDRAM DRAVSSSCCA
Arabidopsis Description
RABF2BRABF2B [Source:UniProtKB/TrEMBL;Acc:A0A178UXV7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.