Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d036973_P001 | Maize | cytosol | 44.0 | 63.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.0 | 33.33 |
| Zm00001d031179_P001 | Maize | extracellular, mitochondrion | 56.0 | 27.45 |
| Zm00001d013583_P001 | Maize | cytosol | 50.0 | 24.63 |
| KRG98019 | Soybean | cytosol | 45.0 | 22.5 |
| PGSC0003DMT400050774 | Potato | cytosol | 44.0 | 22.0 |
| PGSC0003DMT400055259 | Potato | cytosol, plastid | 42.0 | 21.0 |
| KRH20053 | Soybean | endoplasmic reticulum | 45.0 | 19.31 |
| Zm00001d034949_P001 | Maize | extracellular, mitochondrion | 47.0 | 18.95 |
| VIT_04s0079g00760.t01 | Wine grape | cytosol | 36.0 | 15.72 |
| Zm00001d048410_P004 | Maize | plastid | 29.0 | 13.68 |
| Zm00001d028012_P001 | Maize | cytosol, extracellular | 29.0 | 13.06 |
| Zm00001d006433_P001 | Maize | plasma membrane | 25.0 | 12.02 |
| Zm00001d006905_P001 | Maize | mitochondrion | 25.0 | 11.96 |
| Zm00001d021551_P002 | Maize | cytosol | 25.0 | 9.84 |
| Zm00001d024612_P011 | Maize | mitochondrion | 25.0 | 8.68 |
Protein Annotations
| EnsemblPlants:Zm00001d010555_P001 | EnsemblPlants:Zm00001d010555_T001 | EnsemblPlantsGene:Zm00001d010555 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase |
| InterPro:Small_GTPase | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF622 | PFAM:PF00071 | PFscan:PS51419 | ProteinID:AQK94322.1 |
| SUPFAM:SSF52540 | UniParc:UPI00084597E2 | UniProt:A0A1D6FRW9 | MapMan:35.1 | : | : |
Description
Ras-related protein Rab5
Coordinates
chr8:-:120210919..120211837
Molecular Weight (calculated)
10865.9 Da
IEP (calculated)
8.197
GRAVY (calculated)
-0.396
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MPLPAASANG NGTAEQNSCF SKQDAMPSAF RAWKYLQMSV VTCASEAKAY AQENGLFFME TSAKTATNVN DVFYEIAKKL LQGQQVQNPQ GGMVLNQRPP
001: MASSGNKNIN AKLVLLGDVG AGKSSLVLRF VKDQFVEFQE STIGAAFFSQ TLAVNDATVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVF DITNQASFER
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAEI YAQENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPAENP TGMVLPNGPG ATAVSSSCCA
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAEI YAQENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPAENP TGMVLPNGPG ATAVSSSCCA
Arabidopsis Description
ATRAB5ARAB homolog 1 [Source:TAIR;Acc:AT5G45130]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.