Factsheet for Zm00001d024612_P011

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028012_P001	Maize	cytosol, extracellular	37.5	48.65
GSMUA_Achr1P00610_001	Banana	cytosol	26.74	43.02
VIT_02s0012g00710.t01	Wine grape	cytosol	25.69	41.34
GSMUA_Achr5P12680_001	Banana	plasma membrane	29.51	40.87
VIT_15s0021g00640.t01	Wine grape	cytosol	25.35	40.78
CDY48241	Canola	cytosol	29.17	40.38
Solyc01g088560.2.1	Tomato	plastid	29.17	40.38
GSMUA_AchrUn_...	Banana	cytosol	29.17	40.38
CDY30479	Canola	cytosol	29.17	40.38
AT2G44610.1	Thale cress	cytosol	29.17	40.38
CDX95606	Canola	cytosol	29.17	40.38
CDX83425	Canola	cytosol	29.17	40.38
Bra000355.1-P	Field mustard	cytosol	29.17	40.38
Bra004850.1-P	Field mustard	cytosol	29.17	40.38
CDX74672	Canola	cytosol	29.17	40.38
Bra037641.1-P	Field mustard	cytosol	29.17	40.38
PGSC0003DMT400004322	Potato	cytosol	28.82	39.9
KRH77257	Soybean	endoplasmic reticulum	24.31	39.77
VIT_02s0012g00790.t01	Wine grape	cytosol	15.97	39.66
Zm00001d006433_P001	Maize	plasma membrane	28.47	39.42
KRH57563	Soybean	cytosol	28.12	39.32
KRH04283	Soybean	cytosol	28.12	39.32
Zm00001d006905_P001	Maize	mitochondrion	28.12	38.76
KRH28235	Soybean	cytosol	27.78	38.65
KRH77258	Soybean	endoplasmic reticulum	27.43	38.16
CDX81264	Canola	cytosol	25.35	35.78
AT5G64990.2	Thale cress	cytosol	26.39	35.68
Zm00001d036973_P001	Maize	cytosol	8.33	34.78
Bra037802.1-P	Field mustard	cytosol	23.61	34.52
CDY18689	Canola	cytosol	25.0	33.18
Zm00001d021551_P002	Maize	cytosol	28.47	32.28
Zm00001d010555_P001	Maize	cytosol	8.68	25.0
Zm00001d031179_P001	Maize	extracellular, mitochondrion	16.67	23.53
Zm00001d013583_P001	Maize	cytosol	15.97	22.66
Zm00001d034949_P001	Maize	extracellular, mitochondrion	16.32	18.95
Zm00001d048410_P004	Maize	plastid	11.81	16.04
KRH28236	Soybean	cytosol	22.92	13.92
CDY23446	Canola	cytosol	28.82	13.81

Protein Annotations

EntrezGene:100217095	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6J0G9	ProteinID:AQK41579.1	ProteinID:AQK41585.1
ProteinID:AQK41586.1	ProteinID:AQK41589.1	ProteinID:AQK41591.1	ProteinID:AQK41599.1	ProteinID:AQK41608.1	ProteinID:AQK41609.1
ProteinID:AQK41620.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PFscan:PS51257	PANTHER:PTHR45537
SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI0008436402	EnsemblPlantsGene:Zm00001d024612	EnsemblPlants:Zm00001d024612_P011	EnsemblPlants:Zm00001d024612_T011
SEG:seg	:	:	:	:	:

Description

Ras-related protein RABH1b

Coordinates

chr10:+:80319656..80328964

Molecular Weight (calculated)

30734.8 Da

IEP (calculated)

7.376

GRAVY (calculated)

-0.089

Length

288 amino acids

Sequence
(BLAST)

001: MGWRSQCRGS AILPLAHPGI IASCSSHPAV IASRTFLRQP SIGAITGIPA ASPQIPKPRL VSHGKCVLCA RLSPRLRQPA IHGTWVLCPG SSRRPSIRVR
101: DSLIPHVDWV PLCPESSLPP GISVRVRVVV SAVSMEGDPA CGLALADEEA ECSSWDSDDE YQKFIQNMNP PRVTIDNTSC PSAIVIHFFN ELDSYPDFLF
201: TDVTRKVSTD EGEAKAQEHG AMFMETSAKA GFNVKPLFRK IAGSLLGLDA LSSGKQEDMV DINLRPASGS SASGAAAQLE QKSGGCSC

Best Arabidopsis Sequence Match ( AT5G10260.1 )
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VANRQSFLNT
101: SKWIEDVRTE RGSDVIIVLV GNKTDLVDKR QVSIEEGDNK ARDYGVIFIE TSAKAGFNIK PLFRKIAAAL PGMETLSSTK QEDMVDVNLK TSSNSAQGEQ
201: QRGGCAC

Arabidopsis Description

RABH1ERABH1e [Source:UniProtKB/TrEMBL;Acc:A0A178UPG4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.