CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
cytosol 3
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P00610_001	Banana	cytosol	74.43	73.18
KRH57563	Soybean	cytosol	81.82	69.9
KRH04283	Soybean	cytosol	81.82	69.9
KRH31293	Soybean	cytosol	69.89	69.1
KRH28235	Soybean	cytosol	78.41	66.67
KRH77258	Soybean	endoplasmic reticulum	77.84	66.18
GSMUA_AchrUn_...	Banana	cytosol	76.7	64.9
TraesCS2D01G234600.1	Wheat	plastid	75.57	63.94
TraesCS2B01G261200.1	Wheat	cytosol	75.57	63.94
TraesCS2A01G236600.1	Wheat	cytosol	75.57	63.94
Os07t0496000-01	Rice	plasma membrane	75.57	63.94
EER97251	Sorghum	cytosol	75.57	63.94
Zm00001d006433_P001	Maize	plasma membrane	75.57	63.94
HORVU2Hr1G050270.2	Barley	cytosol	75.57	63.94
GSMUA_Achr5P12680_001	Banana	plasma membrane	75.57	63.94
KRH59334	Soybean	endoplasmic reticulum	72.73	61.84
KRG97576	Soybean	cytosol	72.16	61.35
KRH43179	Soybean	cytosol	71.59	60.87
Zm00001d021551_P002	Maize	cytosol	75.0	51.97
VIT_02s0012g00790.t01	Wine grape	cytosol	34.09	51.72
KRH09851	Soybean	cytosol, mitochondrion, plastid	34.09	30.0
KRH60288	Soybean	mitochondrion	33.52	29.65
KRH41580	Soybean	cytosol	32.39	29.38
KRG91957	Soybean	cytosol	32.95	29.0
KRG98019	Soybean	cytosol	32.39	28.5
KRH34819	Soybean	cytosol	31.82	27.32
KRH23467	Soybean	cytosol	16.48	25.89
KRH28236	Soybean	cytosol	67.61	25.11
KRH20053	Soybean	endoplasmic reticulum	32.39	24.46
Zm00001d024612_P011	Maize	mitochondrion	39.77	24.31

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	EMBL:ACUP02000668	EnsemblPlantsGene:GLYMA_01G202400	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0006810	GO:GO:0006890
GO:GO:0006891	GO:GO:0008150	GO:GO:0016787	GO:GO:0042147	UniProt:K7K4V7	EnsemblPlants:KRH77257
ProteinID:KRH77257	ProteinID:KRH77257.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF671	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002956DB0	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:53513956..53517572

Molecular Weight (calculated)

19410.4 Da

IEP (calculated)

8.191

GRAVY (calculated)

-0.078

Length

176 amino acids

Sequence
(BLAST)

001: MTNLTTLIRP RLVLIFYQKL CILKIELFGC SCGDTAGQER FRSLIPSYIR DSSVAVIAYD VASRQTFLNT SKWIEEVRSE RGSDVIIVLV GNKTDLVDKR
101: QVSTEEGEAK SRELNVMFIE ASAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLR SSGGYQSQPQ SGGCAC

Best Arabidopsis Sequence Match ( AT2G22290.1 )
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVVVYD VANRLSFLNT
101: SKWIEEVRNE RAGDVIIVLV GNKTDLVEKR QVSIEEGDSK GREYGVMFIE TSAKAGFNIK PLFRKIAAAL PGMESYSNTK NEDMVDVNLK PTSNSSQGDQ
201: QGGACSC

Arabidopsis Description

RABH1DRas-related protein RABH1d [Source:UniProtKB/Swiss-Prot;Acc:Q9SID8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.