CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41580	Soybean	cytosol	89.45	91.75
VIT_11s0016g04020.t01	Wine grape	cytosol	70.35	80.92
KRH23467	Soybean	cytosol	42.71	75.89
KRG98019	Soybean	cytosol	69.35	69.0
KRH09851	Soybean	cytosol, mitochondrion, plastid	67.84	67.5
KXG20675	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.33	66.0
TraesCS7D01G433800.1	Wheat	cytosol	66.33	63.46
TraesCS7B01G345100.1	Wheat	cytosol	64.82	62.32
Os06t0687100-01	Rice	cytosol	62.31	62.0
KRH20053	Soybean	endoplasmic reticulum	69.35	59.23
HORVU1Hr1G013720.3	Barley	cytosol, mitochondrion, nucleus	59.8	58.62
HORVU2Hr1G027490.2	Barley	cytosol, mitochondrion, nucleus	53.77	56.91
HORVU7Hr1G101140.7	Barley	mitochondrion	59.3	54.38
KRG91957	Soybean	cytosol	48.24	48.0
KRH34819	Soybean	cytosol	46.23	44.88
KRH59334	Soybean	endoplasmic reticulum	39.7	38.16
KRH43179	Soybean	cytosol	39.2	37.68
KRH77258	Soybean	endoplasmic reticulum	38.69	37.2
KRH28235	Soybean	cytosol	38.69	37.2
KRG97576	Soybean	cytosol	38.69	37.2
KRH57563	Soybean	cytosol	37.69	36.41
KRH04283	Soybean	cytosol	37.69	36.41
KRH31293	Soybean	cytosol	31.16	34.83
KRH77257	Soybean	endoplasmic reticulum	29.65	33.52
KRH28236	Soybean	cytosol	20.1	8.44

Protein Annotations

EntrezGene:100782628	MapMan:22.8.1.6	Gene3D:3.40.50.300	EMBL:ACUP02003357	EnsemblPlantsGene:GLYMA_05G231400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0016787	GO:GO:0030139
UniProt:K7KRM9	EnsemblPlants:KRH60288	ProteinID:KRH60288	ProteinID:KRH60288.1	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF683	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI00023393D0	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:40903528..40906444

Molecular Weight (calculated)

22513.9 Da

IEP (calculated)

9.501

GRAVY (calculated)

-0.394

Length

199 amino acids

Sequence
(BLAST)

001: MARTRNKSLQ AKLVLLGDMG AGKTSLVLRF VKGEFSEYQE STIGAAFFTH VLSLNEATVK FDIWDTAGQE RYHSLAPMYY RGAAAAIVVY DITSMDSFVR
101: AKKWVREVQR QANSSLTMFL VANKADLEDE RKVRYEEGEE YAKENGLSFL ETSAKTAQNV NELFYEIAKR LVKANPSRQS GMKLHTRPGE TRRGFLCCT

Best Arabidopsis Sequence Match ( AT5G45130.1 )
(BLAST)

001: MASSGNKNIN AKLVLLGDVG AGKSSLVLRF VKDQFVEFQE STIGAAFFSQ TLAVNDATVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVF DITNQASFER
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAEI YAQENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPAENP TGMVLPNGPG ATAVSSSCCA

Arabidopsis Description

ATRAB5ARAB homolog 1 [Source:TAIR;Acc:AT5G45130]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.