Factsheet for HORVU1Hr1G013720.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus, secretory
iPSORT:	secretory
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G027490.2	Barley	cytosol, mitochondrion, nucleus	77.34	83.51
Os06t0687100-01	Rice	cytosol	72.41	73.5
KXG20675	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.94	72.0
HORVU7Hr1G101140.7	Barley	mitochondrion	74.88	70.05
VIT_11s0016g04020.t01	Wine grape	cytosol	53.2	62.43
KRH60288	Soybean	mitochondrion	58.62	59.8
KRH41580	Soybean	cytosol	56.65	59.28
GSMUA_Achr6P02970_001	Banana	cytosol	56.16	57.0
VIT_09s0002g04600.t01	Wine grape	cytosol	55.66	56.78
KRH23467	Soybean	cytosol	30.54	55.36
KRH09851	Soybean	cytosol, mitochondrion, plastid	53.69	54.5
GSMUA_Achr5P23540_001	Banana	endoplasmic reticulum	61.58	53.88
HORVU5Hr1G002970.1	Barley	plastid	54.68	53.11
HORVU4Hr1G002980.2	Barley	cytosol	54.68	46.44
HORVU4Hr1G072020.1	Barley	cytosol	45.81	35.77
HORVU2Hr1G050270.2	Barley	cytosol	33.0	32.21
HORVU4Hr1G078690.2	Barley	plastid	34.98	23.13

Protein Annotations

MapMan:22.8.1.6	Gene3D:3.40.50.300	UniProt:A0A287EP37	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:HORVU1Hr1G013720	EnsemblPlants:HORVU1Hr1G013720.3
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF683
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000B473FC2	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:+:36892662..36893772

Molecular Weight (calculated)

23046.5 Da

IEP (calculated)

8.623

GRAVY (calculated)

-0.204

Length

203 amino acids

Sequence
(BLAST)

001: SDLRAWVRVQ VLLGDLGAGK TSIVVRFAKG LYYECEESTI GAAFFSHALP VNGVGEDATV RFDIWDTVGQ ERYHSLAPMY YRGAAAAVVV YDITSTDSYT
101: RAKRWVDELQ RQGNPHLVMA LVGNKVDLKK KRKVGTQLFL EYAERNDLFF METSAKTAQN VGELFYYLAE RLVKVHTSHP TGMVLHDDDQ RGVRGRWFCL
201: FRV

Best Arabidopsis Sequence Match ( AT3G54840.1 )
(BLAST)

001: MGCASSLPDR NSGTLSGLSN SENAVPADAK NLRVKLVLLG DSGVGKSCIV LRFVRGQFDA TSKVTVGASF LSQTIALQDS TTVKFEIWDT AGQERYSALA
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS

Arabidopsis Description

RABF1Ras-related protein RABF1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CB01]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.