CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60288	Soybean	mitochondrion	91.75	89.45
VIT_11s0016g04020.t01	Wine grape	cytosol	66.49	74.57
KRH23467	Soybean	cytosol	39.69	68.75
KRG98019	Soybean	cytosol	67.01	65.0
KRH09851	Soybean	cytosol, mitochondrion, plastid	65.98	64.0
KXG20675	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.98	64.0
TraesCS7D01G433800.1	Wheat	cytosol	64.95	60.58
Os06t0687100-01	Rice	cytosol	62.37	60.5
TraesCS7B01G345100.1	Wheat	cytosol	63.4	59.42
HORVU1Hr1G013720.3	Barley	cytosol, mitochondrion, nucleus	59.28	56.65
KRH20053	Soybean	endoplasmic reticulum	67.01	55.79
HORVU2Hr1G027490.2	Barley	cytosol, mitochondrion, nucleus	53.09	54.79
HORVU7Hr1G101140.7	Barley	mitochondrion	58.76	52.53
KRG91957	Soybean	cytosol	47.42	46.0
KRH34819	Soybean	cytosol	45.36	42.93
KRH43179	Soybean	cytosol	37.63	35.27
KRH59334	Soybean	endoplasmic reticulum	37.63	35.27
KRH77258	Soybean	endoplasmic reticulum	37.11	34.78
KRH28235	Soybean	cytosol	37.11	34.78
KRG97576	Soybean	cytosol	37.11	34.78
KRH31293	Soybean	cytosol	31.44	34.27
KRH57563	Soybean	cytosol	36.08	33.98
KRH04283	Soybean	cytosol	36.08	33.98
KRH77257	Soybean	endoplasmic reticulum	29.38	32.39
KRH28236	Soybean	cytosol	20.62	8.44

Protein Annotations

MapMan:22.8.1.6	Gene3D:3.40.50.300	EMBL:ACUP02004772	EnsemblPlantsGene:GLYMA_08G038900	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0016787	GO:GO:0030139	UniProt:K7L4U0
EnsemblPlants:KRH41580	ProteinID:KRH41580	ProteinID:KRH41580.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF683	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002957C90

Description

hypothetical protein

Coordinates

chr8:-:3045698..3047012

Molecular Weight (calculated)

21866.0 Da

IEP (calculated)

8.178

GRAVY (calculated)

-0.306

Length

194 amino acids

Sequence
(BLAST)

001: MISQVLLGDM GAGKTSLVLR FVKGEFSEYQ DSTIGAAFFT QVLSLNEATV KFDIWDTAGQ ERYHSLAPMY YRGAAAAIVV YDITSMDSFV RAKKWVREVL
101: RQEFTSSNSS LTMFLVANKA DLEAERKVRY EEGEEYAKEN GLSFLETSAK TAQNVNELFY EIAKRLAKAN PSRQSGMKLH NRAGETRRGF FCCT

Best Arabidopsis Sequence Match ( AT3G54840.1 )
(BLAST)

001: MGCASSLPDR NSGTLSGLSN SENAVPADAK NLRVKLVLLG DSGVGKSCIV LRFVRGQFDA TSKVTVGASF LSQTIALQDS TTVKFEIWDT AGQERYSALA
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS

Arabidopsis Description

RABF1Ras-related protein RABF1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CB01]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.