Factsheet for TraesCS7B01G345100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G433800.1	Wheat	cytosol	95.65	95.19
KXG20675	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.74	81.5
Os06t0687100-01	Rice	cytosol	76.33	79.0
HORVU7Hr1G101140.7	Barley	mitochondrion	77.29	73.73
VIT_11s0016g04020.t01	Wine grape	cytosol	58.45	69.94
GSMUA_Achr6P02970_001	Banana	cytosol	63.77	66.0
KRH60288	Soybean	mitochondrion	62.32	64.82
VIT_09s0002g04600.t01	Wine grape	cytosol	62.32	64.82
KRH23467	Soybean	cytosol	34.78	64.29
KRH41580	Soybean	cytosol	59.42	63.4
KRH09851	Soybean	cytosol, mitochondrion, plastid	59.9	62.0
GSMUA_Achr5P23540_001	Banana	endoplasmic reticulum	69.08	61.64
TraesCS4B01G019100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	60.39	60.98
TraesCS5B01G014400.1	Wheat	plastid	59.9	59.33
TraesCS4B01G268600.1	Wheat	plastid	48.31	50.25
TraesCS1B01G157100.1	Wheat	cytosol, plastid	47.34	49.0
TraesCS4B01G306900.1	Wheat	cytosol	38.16	36.92
TraesCS2B01G261200.1	Wheat	cytosol	36.23	36.06

Protein Annotations

MapMan:22.8.1.6	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF683	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS7B01G345100
EnsemblPlants:TraesCS7B01G345100.1	TIGR:cd01860	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:-:600964186..600965444

Molecular Weight (calculated)

22617.0 Da

IEP (calculated)

6.932

GRAVY (calculated)

-0.177

Length

207 amino acids

Sequence
(BLAST)

001: MMAPTPSTVI QAKLVLLGDL GAGKTSIVVR FAKGLYYECQ ESTIGAAFFS QALPVSGAGG GEDATVRFDI WDTAGQERYH SLAPMYYRGA AAAVVVYDIT
101: STDSYTRAKR WVDELQRQGN PHLVMALVGN KVDLEKKRNV GTQEALEYAE RNGLFFMETS AKTAQNVGEL FYELAERLVK VRPNHPTGMV LHEGQPGVGG
201: RWFCCSG

Best Arabidopsis Sequence Match ( AT3G54840.1 )
(BLAST)

001: MGCASSLPDR NSGTLSGLSN SENAVPADAK NLRVKLVLLG DSGVGKSCIV LRFVRGQFDA TSKVTVGASF LSQTIALQDS TTVKFEIWDT AGQERYSALA
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS

Arabidopsis Description

RABF1Ras-related protein RABF1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CB01]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.