CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09851	Soybean	cytosol, mitochondrion, plastid	92.86	52.0
VIT_09s0002g04600.t01	Wine grape	cytosol	81.25	45.73
KRH60288	Soybean	mitochondrion	75.89	42.71
KRH41580	Soybean	cytosol	68.75	39.69
GSMUA_Achr6P02970_001	Banana	cytosol	70.54	39.5
KRG98019	Soybean	cytosol	66.96	37.5
GSMUA_Achr5P23540_001	Banana	endoplasmic reticulum	77.68	37.5
KXG20675	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.96	37.5
TraesCS7B01G345100.1	Wheat	cytosol	64.29	34.78
TraesCS7D01G433800.1	Wheat	cytosol	64.29	34.62
Os06t0687100-01	Rice	cytosol	59.82	33.5
HORVU2Hr1G027490.2	Barley	cytosol, mitochondrion, nucleus	54.46	32.45
KRH20053	Soybean	endoplasmic reticulum	66.96	32.19
HORVU1Hr1G013720.3	Barley	cytosol, mitochondrion, nucleus	55.36	30.54
HORVU7Hr1G101140.7	Barley	mitochondrion	58.93	30.41
KRG91957	Soybean	cytosol	50.89	28.5
KRH34819	Soybean	cytosol	50.89	27.8
KRH04283	Soybean	cytosol	41.07	22.33
KRH57563	Soybean	cytosol	41.07	22.33
KRG97576	Soybean	cytosol	40.18	21.74
KRH77258	Soybean	endoplasmic reticulum	40.18	21.74
KRH28235	Soybean	cytosol	40.18	21.74
KRH59334	Soybean	endoplasmic reticulum	39.29	21.26
KRH43179	Soybean	cytosol	39.29	21.26
KRH77257	Soybean	endoplasmic reticulum	25.89	16.48
KRH31293	Soybean	cytosol	25.89	16.29
KRH28236	Soybean	cytosol	10.71	2.53

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EMBL:ACUP02008468	EnsemblPlantsGene:GLYMA_13G359100	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0016787	GO:GO:0030139	UniProt:I1M5L4
EnsemblPlants:KRH23467	ProteinID:KRH23467	ProteinID:KRH23467.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF825	SMART:SM00173	SMART:SM00174	SMART:SM00175
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000233B531	:

Description

hypothetical protein

Coordinates

chr13:-:44647319..44649779

Molecular Weight (calculated)

12231.8 Da

IEP (calculated)

10.067

GRAVY (calculated)

0.101

Length

112 amino acids

Sequence
(BLAST)

001: MARPGNKIIQ AKLVLLGDMG TGKTSIALRF VKGHFFPNQE PTIGAAFFTQ ILSLSEATVK FDVWDTAGQE RYHSLAPMYY RGAAAAIVVY DISSVDTFVR
101: AKKMGSGIAN TW

Best Arabidopsis Sequence Match ( AT4G19640.1 )
(BLAST)

001: MAAAGNKSIN AKLVLLGDVG AGKSSLVLRF VKDQFVEFQE STIGAAFFSQ TLAVNDATVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVF DVTNQASFER
101: AKKWVQELQA QGNPNMVMAL AGNKSDLLDA RKVTAEDAQT YAQENGLFFM ETSAKTATNV KEIFYEIARR LPRVQPTENP TGMVLPDRAM DRAVSSSCCA

Arabidopsis Description

RABF2BRABF2B [Source:UniProtKB/TrEMBL;Acc:A0A178UXV7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.