Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 3
- cytosol 2
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P02970_001 | Banana | cytosol | 75.86 | 88.0 |
| KRH23467 | Soybean | cytosol | 37.5 | 77.68 |
| KRH09851 | Soybean | cytosol, mitochondrion, plastid | 66.81 | 77.5 |
| VIT_09s0002g04600.t01 | Wine grape | cytosol | 66.38 | 77.39 |
| KXG20675 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 62.93 | 73.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.97 | 70.83 |
| TraesCS7B01G345100.1 | Wheat | cytosol | 61.64 | 69.08 |
| Os06t0687100-01 | Rice | cytosol | 59.48 | 69.0 |
| TraesCS7D01G433800.1 | Wheat | cytosol | 61.21 | 68.27 |
| GSMUA_Achr7P16440_001 | Banana | cytosol | 54.74 | 62.87 |
| HORVU1Hr1G013720.3 | Barley | cytosol, mitochondrion, nucleus | 53.88 | 61.58 |
| GSMUA_Achr9P10010_001 | Banana | cytosol | 54.31 | 61.46 |
| HORVU2Hr1G027490.2 | Barley | cytosol, mitochondrion, nucleus | 49.14 | 60.64 |
| GSMUA_Achr1P03160_001 | Banana | cytosol | 44.4 | 58.52 |
| HORVU7Hr1G101140.7 | Barley | mitochondrion | 53.45 | 57.14 |
| GSMUA_Achr2P10990_001 | Banana | cytosol | 59.05 | 56.85 |
| GSMUA_Achr4P29680_001 | Banana | cytosol | 56.9 | 56.41 |
| GSMUA_Achr6P31600_001 | Banana | cytosol | 49.14 | 55.88 |
| GSMUA_Achr1P02060_001 | Banana | cytosol | 57.33 | 55.65 |
| GSMUA_Achr4P29310_001 | Banana | plastid | 46.12 | 48.86 |
| GSMUA_Achr5P10670_001 | Banana | cytosol | 40.52 | 48.7 |
| GSMUA_Achr11P... | Banana | mitochondrion | 35.34 | 39.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 15.52 | 38.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.48 | 38.46 |
| GSMUA_Achr5P12680_001 | Banana | plasma membrane | 34.48 | 38.46 |
| GSMUA_Achr2P22200_001 | Banana | cytosol | 34.05 | 38.16 |
| GSMUA_Achr6P10400_001 | Banana | cytosol | 32.76 | 36.72 |
| GSMUA_Achr1P00610_001 | Banana | cytosol | 28.02 | 36.31 |
| GSMUA_Achr6P32620_001 | Banana | mitochondrion | 29.31 | 35.42 |
Protein Annotations
| MapMan:22.8.1.6 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| EnsemblPlantsGene:GSMUA_Achr5G23540_001 | EnsemblPlants:GSMUA_Achr5P23540_001 | EnsemblPlants:GSMUA_Achr5T23540_001 | UniProt:M0T129 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF683 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | TMHMM:TMhelix | UniParc:UPI000296115A | : | : | : |
Description
Ras-related protein RHN1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G23540_001]
Coordinates
chr5:+:25236266..25242386
Molecular Weight (calculated)
25742.2 Da
IEP (calculated)
9.354
GRAVY (calculated)
-0.090
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSFSANRNP QTIPLITICS SAPVVLLQVL GLMARMGSGN IQAKLVLLGD MGTGKTSIVL RFVKGQYFDC QESTIGAAFF SQVLSLNEAT VKFDIWDTAG
101: QERYHSLAPM YYRGAAAAIV VYDISSMDSF IRAKKWVQEL QRQGNPYLIM ALVANKVDLE SKRKVGSEEG LQYAQENGLF FMETSAKTAE NINELFYEIA
201: KRLAKARPSR SSGMRLSSET QDRGRRLFCC SG
101: QERYHSLAPM YYRGAAAAIV VYDISSMDSF IRAKKWVQEL QRQGNPYLIM ALVANKVDLE SKRKVGSEEG LQYAQENGLF FMETSAKTAE NINELFYEIA
201: KRLAKARPSR SSGMRLSSET QDRGRRLFCC SG
001: MGCASSLPDR NSGTLSGLSN SENAVPADAK NLRVKLVLLG DSGVGKSCIV LRFVRGQFDA TSKVTVGASF LSQTIALQDS TTVKFEIWDT AGQERYSALA
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS
Arabidopsis Description
RABF1Ras-related protein RABF1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CB01]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.