Factsheet for GSMUA_AchrUn_randomP08160_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98019	Soybean	cytosol	86.81	62.5
Solyc02g036450.2.1	Tomato	cytosol, plastid	80.56	58.0
PGSC0003DMT400055259	Potato	cytosol, plastid	80.56	58.0
Solyc02g081380.2.1	Tomato	plastid	79.86	57.5
PGSC0003DMT400050774	Potato	cytosol	79.86	57.5
VIT_04s0079g00760.t01	Wine grape	cytosol	86.81	54.59
KRH20053	Soybean	endoplasmic reticulum	86.81	53.65
GSMUA_Achr4P29680_001	Banana	cytosol	85.42	52.56
GSMUA_Achr7P16440_001	Banana	cytosol	73.61	52.48
GSMUA_Achr2P10990_001	Banana	cytosol	86.81	51.87
GSMUA_Achr1P02060_001	Banana	cytosol	85.42	51.46
GSMUA_Achr9P10010_001	Banana	cytosol	72.22	50.73
GSMUA_Achr6P02970_001	Banana	cytosol	66.67	48.0
GSMUA_Achr6P31600_001	Banana	cytosol	65.97	46.57
GSMUA_Achr1P03160_001	Banana	cytosol	54.86	44.89
GSMUA_Achr5P23540_001	Banana	endoplasmic reticulum	70.83	43.97
GSMUA_Achr5P10670_001	Banana	cytosol	52.08	38.86
GSMUA_Achr4P29310_001	Banana	plastid	52.08	34.25
GSMUA_Achr11P...	Banana	mitochondrion	45.83	31.88
GSMUA_Achr2P22200_001	Banana	cytosol	41.67	28.99
GSMUA_AchrUn_...	Banana	cytosol	40.97	28.37
GSMUA_Achr6P10400_001	Banana	cytosol	40.28	28.02
GSMUA_Achr5P12680_001	Banana	plasma membrane	40.28	27.88
GSMUA_Achr1P00610_001	Banana	cytosol	31.94	25.7
GSMUA_Achr6P32620_001	Banana	mitochondrion	34.03	25.52
GSMUA_AchrUn_...	Banana	cytosol	4.17	6.45

Protein Annotations

MapMan:22.8.1.6	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_AchrUn_randomG08160_001	EnsemblPlants:GSMUA_AchrUn_randomP08160_001	EnsemblPlants:GSMUA_AchrUn_randomT08160_001
UniProt:M0U7C7	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF622	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000294B1F3	:	:	:

Description

Ras-related protein RHN1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08160_001]

Coordinates

chrchrUn_random:-:34977675..34978518

Molecular Weight (calculated)

15819.9 Da

IEP (calculated)

7.353

GRAVY (calculated)

-0.172

Length

144 amino acids

Sequence
(BLAST)

001: MATTGNSSIN AKLVLLGDMG AGKSSLVLRF VKGQFLEFQE STIGAAFFSQ MLAVGDATVN FEIWDTAGQE RYHSLAPMYY RGAAAAIIVY DISSSESFER
101: AKKWVQELQK QGNPNMVRAL AGNKCDLEDK RKVTTEVTPV PDKF

Best Arabidopsis Sequence Match ( AT4G19640.3 )
(BLAST)

001: MAAAGNKSIN AKLVLLGDVG AGKSSLVLRF VKDQFVEFQE STIGAAFFSQ TLAVNDATVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVF DVTNQASFER
101: AKKWVQELQA QGNPNMVMAL AGNKSDLLDA RKVTAEVSKS FSVLTDFSHY EVRILLSNIK LSYVCVIADH HVERVKLYFE ISHVTFDRSQ NIR

Arabidopsis Description

RABF2BRABF2B [Source:UniProtKB/TrEMBL;Acc:A0A178UXV7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.