Factsheet for GSMUA_AchrUn_randomP04770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P00610_001	Banana	cytosol	83.17	96.65
GSMUA_Achr5P12680_001	Banana	plasma membrane	95.19	95.19
Zm00001d006433_P001	Maize	plasma membrane	95.19	95.19
EER97251	Sorghum	cytosol	95.19	95.19
Os07t0496000-01	Rice	plasma membrane	94.71	94.71
TraesCS2A01G236600.1	Wheat	cytosol	94.71	94.71
TraesCS2B01G261200.1	Wheat	cytosol	94.71	94.71
TraesCS2D01G234600.1	Wheat	plastid	94.71	94.71
HORVU2Hr1G050270.2	Barley	cytosol	94.71	94.71
PGSC0003DMT400004322	Potato	cytosol	93.75	93.75
Solyc01g088560.2.1	Tomato	plastid	93.75	93.75
VIT_15s0021g00640.t01	Wine grape	cytosol	79.81	92.74
AT2G44610.1	Thale cress	cytosol	92.31	92.31
Bra037641.1-P	Field mustard	cytosol	92.31	92.31
CDX95606	Canola	cytosol	92.31	92.31
CDX74672	Canola	cytosol	92.31	92.31
CDY48241	Canola	cytosol	92.31	92.31
CDY30479	Canola	cytosol	92.31	92.31
CDX83425	Canola	cytosol	92.31	92.31
KRH28235	Soybean	cytosol	91.83	92.27
KRH77258	Soybean	endoplasmic reticulum	91.83	92.27
Bra004850.1-P	Field mustard	cytosol	91.83	91.83
VIT_02s0012g00710.t01	Wine grape	cytosol	78.85	91.62
Bra000355.1-P	Field mustard	cytosol	91.35	91.35
KRH04283	Soybean	cytosol	90.38	91.26
KRH57563	Soybean	cytosol	90.38	91.26
GSMUA_Achr2P22200_001	Banana	cytosol	87.5	87.92
GSMUA_Achr6P10400_001	Banana	cytosol	86.54	86.96
Zm00001d021551_P002	Maize	cytosol	94.71	77.56
KRH77257	Soybean	endoplasmic reticulum	64.9	76.7
AT5G64990.2	Thale cress	cytosol	75.0	73.24
CDX81264	Canola	cytosol	71.63	73.04
Bra037802.1-P	Field mustard	cytosol	66.83	70.56
CDY18689	Canola	cytosol	72.12	69.12
VIT_02s0012g00790.t01	Wine grape	cytosol	29.33	52.59
GSMUA_Achr1P03160_001	Banana	cytosol	37.02	43.75
GSMUA_AchrUn_...	Banana	cytosol	28.37	40.97
GSMUA_Achr6P02970_001	Banana	cytosol	38.94	40.5
GSMUA_Achr7P16440_001	Banana	cytosol	38.46	39.6
GSMUA_Achr9P10010_001	Banana	cytosol	36.54	37.07
GSMUA_Achr6P31600_001	Banana	cytosol	36.06	36.76
GSMUA_Achr5P10670_001	Banana	cytosol	33.17	35.75
GSMUA_Achr4P29310_001	Banana	plastid	37.5	35.62
GSMUA_Achr1P02060_001	Banana	cytosol	40.38	35.15
GSMUA_Achr4P29680_001	Banana	cytosol	39.42	35.04
GSMUA_Achr5P23540_001	Banana	endoplasmic reticulum	38.46	34.48
GSMUA_Achr2P10990_001	Banana	cytosol	38.94	33.61
GSMUA_Achr11P...	Banana	mitochondrion	32.21	32.37
GSMUA_Achr6P32620_001	Banana	mitochondrion	29.81	32.29
CDY23446	Canola	cytosol	91.83	31.78
GSMUA_AchrUn_...	Banana	cytosol	13.94	31.18
Zm00001d024612_P011	Maize	mitochondrion	40.38	29.17
KRH28236	Soybean	cytosol	60.1	26.37

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_AchrUn_randomG04770_001	EnsemblPlants:GSMUA_AchrUn_randomP04770_001	EnsemblPlants:GSMUA_AchrUn_randomT04770_001
UniProt:M0U6D9	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF840	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002958FAD	SEG:seg	:

Description

Ras-related protein RABH1B [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04770_001]

Coordinates

chrchrUn_random:-:18761363..18766302

Molecular Weight (calculated)

23168.7 Da

IEP (calculated)

8.166

GRAVY (calculated)

-0.179

Length

208 amino acids

Sequence
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: SKWIEEVRTE RGSDVIIVLV GNKTDLVDKR QVPIEEGEAK AQELGVMFIE TSAKAGFNIK ALFRKIAAAL PGMENLSSAK QEDMVDVNLR SLNANSSQSQ
201: SQSGGCRC

Best Arabidopsis Sequence Match ( AT2G44610.1 )
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC

Arabidopsis Description

RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.