Factsheet for TraesCS2A01G236600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0496000-01	Rice	plasma membrane	100.0	100.0
TraesCS2B01G261200.1	Wheat	cytosol	100.0	100.0
HORVU2Hr1G050270.2	Barley	cytosol	100.0	100.0
TraesCS2D01G234600.1	Wheat	plastid	100.0	100.0
Zm00001d006433_P001	Maize	plasma membrane	99.04	99.04
EER97251	Sorghum	cytosol	99.04	99.04
VIT_15s0021g00640.t01	Wine grape	cytosol	82.21	95.53
GSMUA_AchrUn_...	Banana	cytosol	94.71	94.71
PGSC0003DMT400004322	Potato	cytosol	94.23	94.23
Solyc01g088560.2.1	Tomato	plastid	94.23	94.23
GSMUA_Achr5P12680_001	Banana	plasma membrane	93.75	93.75
VIT_02s0012g00710.t01	Wine grape	cytosol	80.29	93.3
GSMUA_Achr1P00610_001	Banana	cytosol	80.29	93.3
CDY48241	Canola	cytosol	92.79	92.79
CDY30479	Canola	cytosol	92.79	92.79
CDX95606	Canola	cytosol	92.79	92.79
CDX83425	Canola	cytosol	92.79	92.79
CDX74672	Canola	cytosol	92.79	92.79
Bra037641.1-P	Field mustard	cytosol	92.79	92.79
AT2G44610.1	Thale cress	cytosol	92.79	92.79
Bra004850.1-P	Field mustard	cytosol	92.31	92.31
KRH77258	Soybean	endoplasmic reticulum	91.83	92.27
Bra000355.1-P	Field mustard	cytosol	91.83	91.83
KRH28235	Soybean	cytosol	91.35	91.79
KRH04283	Soybean	cytosol	89.9	90.78
KRH57563	Soybean	cytosol	89.9	90.78
Zm00001d021551_P002	Maize	cytosol	98.56	80.71
TraesCS4A01G407500.1	Wheat	cytosol	80.29	78.04
KRH77257	Soybean	endoplasmic reticulum	63.94	75.57
CDX81264	Canola	cytosol	72.6	74.02
AT5G64990.2	Thale cress	cytosol	75.0	73.24
Bra037802.1-P	Field mustard	cytosol	68.27	72.08
CDY18689	Canola	cytosol	73.08	70.05
VIT_02s0012g00790.t01	Wine grape	cytosol	29.81	53.45
TraesCS1A01G140700.1	Wheat	cytosol	32.21	43.79
TraesCS4A01G035800.1	Wheat	plastid	35.1	36.68
TraesCS4A01G294600.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	36.06	36.59
CDY23446	Canola	cytosol	92.31	31.95
KRH28236	Soybean	cytosol	59.13	25.95

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF840	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS2A01G236600
EnsemblPlants:TraesCS2A01G236600.1	TIGR:cd01861	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:-:304979368..304982589

Molecular Weight (calculated)

22946.5 Da

IEP (calculated)

8.170

GRAVY (calculated)

-0.131

Length

208 amino acids

Sequence
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVFD VASRQSFLNT
101: SKWIEEVRTE RGSDVIIVLV GNKTDLVDKR QVSIEEGEGK AKDLGVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSAK QEDMVDVNLK SSNANSSQSQ
201: AQAGGCSC

Best Arabidopsis Sequence Match ( AT2G44610.1 )
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC

Arabidopsis Description

RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.