Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004850.1-P Field mustard cytosol 99.52 99.52
CDY48241 Canola cytosol 99.52 99.52
AT2G44610.1 Thale cress cytosol 99.52 99.52
CDX95606 Canola cytosol 99.52 99.52
CDX83425 Canola cytosol 99.52 99.52
CDY30479 Canola cytosol 98.56 98.56
TraesCS2A01G236600.1 Wheat cytosol 92.79 92.79
GSMUA_Achr5P12680_001 Banana plasma membrane 92.79 92.79
HORVU2Hr1G050270.2 Barley cytosol 92.79 92.79
Os07t0496000-01 Rice plasma membrane 92.79 92.79
TraesCS2B01G261200.1 Wheat cytosol 92.79 92.79
TraesCS2D01G234600.1 Wheat plastid 92.79 92.79
GSMUA_AchrUn_... Banana cytosol 92.31 92.31
EER97251 Sorghum cytosol 91.83 91.83
Zm00001d006433_P001 Maize plasma membrane 91.83 91.83
GSMUA_Achr1P00610_001 Banana cytosol 78.85 91.62
CDX96987 Canola cytosol 86.54 87.38
CDX69850 Canola cytosol 85.1 85.92
CDX78373 Canola cytosol 85.1 85.51
CDX81166 Canola cytosol 85.1 85.51
CDY13772 Canola cytosol 83.17 83.57
CDY63926 Canola cytosol 80.77 78.5
Zm00001d021551_P002 Maize cytosol 92.31 75.59
CDX81264 Canola cytosol 72.12 73.53
CDY18689 Canola cytosol 71.63 68.66
CDY31610 Canola mitochondrion 80.29 64.73
CDX76936 Canola cytosol 77.88 58.91
CDX82579 Canola cytosol 40.38 42.0
CDY39412 Canola cytosol 40.38 42.0
CDY23153 Canola cytosol 39.42 41.0
CDX99356 Canola cytosol 39.42 40.8
CDY13065 Canola cytosol 38.94 40.5
CDY55834 Canola cytosol, plastid 38.94 39.9
CDX78272 Canola cytosol 38.94 39.9
CDX78949 Canola cytosol 38.46 39.8
CDY61658 Canola cytosol 38.46 39.6
CDY23446 Canola cytosol 98.08 33.94
CDX78945 Canola cytosol 8.17 33.33
CDY09323 Canola extracellular, plastid, vacuole 16.83 30.7
Zm00001d024612_P011 Maize mitochondrion 40.38 29.17
CDY02896 Canola endoplasmic reticulum, golgi 31.73 24.54
Protein Annotations
MapMan:22.8.1.8Gene3D:3.40.50.300GO:A0A078CCT7EnsemblPlants:CDX74672ProteinID:CDX74672ProteinID:CDX74672.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00116622001InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449PFscan:PS51419
PANTHER:PTHR24073PANTHER:PTHR24073:SF840SMART:SM00173SMART:SM00174SMART:SM00175SMART:SM00176
SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231UniParc:UPI0004EE559F:
Description
BnaA05g04180D
Coordinates
chrLK031802:-:108707..111361
Molecular Weight (calculated)
23104.7 Da
IEP (calculated)
8.164
GRAVY (calculated)
-0.125
Length
208 amino acids
Sequence
(BLAST)
001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELSVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC
Best Arabidopsis Sequence Match ( AT2G44610.1 )
(BLAST)
001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC
Arabidopsis Description
RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.