Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18689 | Canola | cytosol | 97.06 | 91.24 |
| AT5G64990.2 | Thale cress | cytosol | 82.35 | 78.87 |
| CDX69850 | Canola | cytosol | 77.45 | 76.7 |
| CDX96987 | Canola | cytosol | 77.45 | 76.7 |
| CDX78373 | Canola | cytosol | 75.49 | 74.4 |
| CDX81166 | Canola | cytosol | 75.49 | 74.4 |
| GSMUA_Achr5P12680_001 | Banana | plasma membrane | 75.0 | 73.56 |
| GSMUA_Achr1P00610_001 | Banana | cytosol | 64.22 | 73.18 |
| VIT_02s0012g00710.t01 | Wine grape | cytosol | 64.22 | 73.18 |
| Solyc01g088560.2.1 | Tomato | plastid | 74.51 | 73.08 |
| PGSC0003DMT400004322 | Potato | cytosol | 74.51 | 73.08 |
| TraesCS2B01G261200.1 | Wheat | cytosol | 74.02 | 72.6 |
| TraesCS2A01G236600.1 | Wheat | cytosol | 74.02 | 72.6 |
| Os07t0496000-01 | Rice | plasma membrane | 74.02 | 72.6 |
| TraesCS2D01G234600.1 | Wheat | plastid | 74.02 | 72.6 |
| HORVU2Hr1G050270.2 | Barley | cytosol | 74.02 | 72.6 |
| CDX83425 | Canola | cytosol | 73.53 | 72.12 |
| CDX95606 | Canola | cytosol | 73.53 | 72.12 |
| CDY48241 | Canola | cytosol | 73.53 | 72.12 |
| Zm00001d006433_P001 | Maize | plasma membrane | 73.53 | 72.12 |
| EER97251 | Sorghum | cytosol | 73.53 | 72.12 |
| CDY30479 | Canola | cytosol | 73.53 | 72.12 |
| CDX74672 | Canola | cytosol | 73.53 | 72.12 |
| CDY13772 | Canola | cytosol | 73.04 | 71.98 |
| GSMUA_AchrUn_... | Banana | cytosol | 73.04 | 71.63 |
| KRH77258 | Soybean | endoplasmic reticulum | 72.55 | 71.5 |
| KRH28235 | Soybean | cytosol | 72.06 | 71.01 |
| CDY63926 | Canola | cytosol | 68.63 | 65.42 |
| Zm00001d021551_P002 | Maize | cytosol | 73.04 | 58.66 |
| CDY31610 | Canola | mitochondrion | 68.14 | 53.88 |
| CDX76936 | Canola | cytosol | 67.16 | 49.82 |
| CDX99356 | Canola | cytosol | 38.24 | 38.81 |
| CDY39412 | Canola | cytosol | 37.25 | 38.0 |
| CDX82579 | Canola | cytosol | 37.25 | 38.0 |
| CDX78949 | Canola | cytosol | 37.25 | 37.81 |
| CDY23153 | Canola | cytosol | 36.76 | 37.5 |
| CDY13065 | Canola | cytosol | 36.76 | 37.5 |
| CDY55834 | Canola | cytosol, plastid | 36.27 | 36.45 |
| CDX78272 | Canola | cytosol | 36.27 | 36.45 |
| CDY61658 | Canola | cytosol | 35.78 | 36.14 |
| CDX78945 | Canola | cytosol | 7.35 | 29.41 |
| CDY09323 | Canola | extracellular, plastid, vacuole | 15.69 | 28.07 |
| Zm00001d024612_P011 | Maize | mitochondrion | 35.78 | 25.35 |
| CDY23446 | Canola | cytosol | 73.53 | 24.96 |
| CDY02896 | Canola | endoplasmic reticulum, golgi | 29.9 | 22.68 |
Protein Annotations
| MapMan:22.8.1.8 | Gene3D:3.40.50.300 | GO:A0A078CZ38 | EnsemblPlants:CDX81264 | ProteinID:CDX81264 | ProteinID:CDX81264.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00134762001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF630 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EDFE92 | : |
Description
BnaC09g06750D
Coordinates
chrLK031824:-:521035..522344
Molecular Weight (calculated)
22949.3 Da
IEP (calculated)
6.921
GRAVY (calculated)
-0.297
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHLGNYKLV FLGDQAVGKT SIITCFMYGN FDTNYQATIG IDFLSKTMRH EDTTFRLQLW DTAGQERFKS LIPSYIRDSS VAVIVYDVAN KQSFINASKW
101: IEDVRAERGN QVIIALVGNK TDLVHRRQVS IEEGDNKARE LGALFIETSA KAGFNIKPLF CKIASALQGT ETQTWTRQED LVDVNLKPMT NLSHSEQQQG
201: NCSC
101: IEDVRAERGN QVIIALVGNK TDLVHRRQVS IEEGDNKARE LGALFIETSA KAGFNIKPLF CKIASALQGT ETQTWTRQED LVDVNLKPMT NLSHSEQQQG
201: NCSC
001: MGDLGKGYKL VFLGDQGVGK TSIITCFMYG KFDTSYQATI GIDFLSKTTR YEDRTFRLQL WDTAGQERFK SLVPSYIRDS SVAVIVYDVA SKQSFINTSK
101: WIEEVRAERG SYVIIVLVGN KTDLVNKRQV SIEEGENKAR EFGALFMETS AKAGFNIKPL FCKITSALQG NEAVSWTKQE DLVDVNLKPL MFSSQANHQQ
201: ESNCSC
101: WIEEVRAERG SYVIIVLVGN KTDLVNKRQV SIEEGENKAR EFGALFMETS AKAGFNIKPL FCKITSALQG NEAVSWTKQE DLVDVNLKPL MFSSQANHQQ
201: ESNCSC
Arabidopsis Description
AtRABH1aRAB GTPase homolog H1A [Source:UniProtKB/TrEMBL;Acc:F4KGG4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.