CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
golgi 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038535.1-P	Field mustard	cytosol	100.0	100.0
AT2G22290.1	Thale cress	cytosol	95.65	95.65
KRH43179	Soybean	cytosol	88.89	88.89
KRH59334	Soybean	endoplasmic reticulum	88.89	88.89
KRG97576	Soybean	cytosol	88.41	88.41
CDX96987	Canola	cytosol	86.96	87.38
KRH31293	Soybean	cytosol	74.88	87.08
PGSC0003DMT400056111	Potato	cytosol	86.96	86.96
CDX69850	Canola	cytosol	86.47	86.89
EER97564	Sorghum	cytosol	87.44	86.6
Zm00001d006905_P001	Maize	mitochondrion	87.44	86.6
Solyc03g078570.2.1	Tomato	cytosol	86.47	86.47
GSMUA_Achr6P10400_001	Banana	cytosol	85.99	85.99
GSMUA_Achr2P22200_001	Banana	cytosol	85.99	85.99
CDX78373	Canola	cytosol	85.99	85.99
CDX81166	Canola	cytosol	85.99	85.99
VIT_00s0665g00040.t01	Wine grape	extracellular	73.91	85.96
CDY30479	Canola	cytosol	83.57	83.17
CDX74672	Canola	cytosol	83.57	83.17
CDY48241	Canola	cytosol	83.57	83.17
CDX83425	Canola	cytosol	83.57	83.17
CDX95606	Canola	cytosol	83.57	83.17
CDY63926	Canola	cytosol	84.54	81.78
Os03t0191400-01	Rice	plasma membrane	78.26	75.35
KXG39985	Sorghum	cytosol	77.29	75.12
TraesCS4D01G305100.1	Wheat	cytosol	76.33	73.83
TraesCS4A01G407500.1	Wheat	cytosol	75.85	73.36
CDX81264	Canola	cytosol	71.98	73.04
TraesCS4B01G306900.1	Wheat	cytosol	75.36	72.9
CDX76936	Canola	cytosol	91.3	68.73
CDY18689	Canola	cytosol	71.98	68.66
CDY31610	Canola	mitochondrion	84.06	67.44
Zm00001d028012_P001	Maize	cytosol, extracellular	64.73	60.36
HORVU4Hr1G078690.2	Barley	plastid	75.85	51.14
CDX99356	Canola	cytosol	37.68	38.81
CDY61658	Canola	cytosol	37.2	38.12
CDY39412	Canola	cytosol	36.72	38.0
CDY23153	Canola	cytosol	36.72	38.0
CDY13065	Canola	cytosol	36.72	38.0
CDX82579	Canola	cytosol	36.72	38.0
CDY55834	Canola	cytosol, plastid	37.2	37.93
CDX78272	Canola	cytosol	37.2	37.93
CDX78949	Canola	cytosol	36.72	37.81
CDX78945	Canola	cytosol	7.25	29.41
CDY23446	Canola	cytosol	84.06	28.95
CDY09323	Canola	extracellular, plastid, vacuole	14.98	27.19
CDY02896	Canola	endoplasmic reticulum, golgi	31.88	24.54

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	GO:A0A078FL99	UniProt:A0A078FL99	EnsemblPlants:CDY13772	ProteinID:CDY13772
ProteinID:CDY13772.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00078205001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF475	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002541F5B
SEG:seg	:	:	:	:	:

Description

BnaA09g42740DBnaA09g42740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FL99]

Coordinates

chrLK032038:-:266746..268236

Molecular Weight (calculated)

23047.5 Da

IEP (calculated)

6.714

GRAVY (calculated)

-0.215

Length

207 amino acids

Sequence
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVVVYD VSNRLSFLNT
101: SKWIEEVRTE RAGDVIIVLV GNKTDLVDKR QVSIEEGDSK GREYGVIFIE TSAKAGFNIK PLFRKIAAAL PGMDSYSNMK TEDMVDVNLK ATSNSSQGDQ
201: QGGGCSC

Best Arabidopsis Sequence Match ( AT2G22290.1 )
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVVVYD VANRLSFLNT
101: SKWIEEVRNE RAGDVIIVLV GNKTDLVEKR QVSIEEGDSK GREYGVMFIE TSAKAGFNIK PLFRKIAAAL PGMESYSNTK NEDMVDVNLK PTSNSSQGDQ
201: QGGACSC

Arabidopsis Description

RABH1DRas-related protein RABH1d [Source:UniProtKB/Swiss-Prot;Acc:Q9SID8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.