Factsheet for TraesCS4D01G305100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G306900.1	Wheat	cytosol	98.6	98.6
TraesCS4A01G407500.1	Wheat	cytosol	97.2	97.2
Os03t0191400-01	Rice	plasma membrane	87.85	87.44
KXG39985	Sorghum	cytosol	86.45	86.85
GSMUA_Achr2P22200_001	Banana	cytosol	78.97	81.64
TraesCS2D01G234600.1	Wheat	plastid	78.5	80.77
KRH59334	Soybean	endoplasmic reticulum	76.64	79.23
Solyc05g051570.2.1	Tomato	nucleus	76.17	78.74
Solyc03g078570.2.1	Tomato	cytosol	76.17	78.74
PGSC0003DMT400056111	Potato	cytosol	76.17	78.74
PGSC0003DMT400018619	Potato	cytosol	76.17	78.74
GSMUA_Achr6P10400_001	Banana	cytosol	76.17	78.74
KRH43179	Soybean	cytosol	76.17	78.74
AT5G10260.1	Thale cress	cytosol	75.7	78.26
KRG97576	Soybean	cytosol	75.7	78.26
KRH31293	Soybean	cytosol	64.49	77.53
VIT_00s0665g00040.t01	Wine grape	extracellular	64.02	76.97
CDX81166	Canola	cytosol	74.3	76.81
CDX78373	Canola	cytosol	74.3	76.81
Bra006054.1-P	Field mustard	cytosol	74.3	76.81
CDX96987	Canola	cytosol	73.83	76.7
CDX69850	Canola	cytosol	73.83	76.7
Bra009046.1-P	Field mustard	cytosol	73.83	76.7
CDY13772	Canola	cytosol	73.83	76.33
Bra038535.1-P	Field mustard	cytosol	73.83	76.33
AT2G22290.1	Thale cress	cytosol	72.43	74.88
Zm00001d028012_P001	Maize	cytosol, extracellular	74.3	71.62
HORVU4Hr1G078690.2	Barley	plastid	97.66	68.08
CDX76936	Canola	cytosol	71.03	55.27
TraesCS4D01G267900.1	Wheat	cytosol	34.11	43.71
TraesCS1D01G139500.1	Wheat	cytosol, plastid	35.05	37.5
TraesCS7D01G433800.1	Wheat	cytosol	35.98	37.02
TraesCS5D01G022200.2	Wheat	golgi	34.58	35.41
TraesCS4D01G017300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	35.05	34.88

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF840	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS4D01G305100
EnsemblPlants:TraesCS4D01G305100.1	TIGR:cd01861	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:+:473809683..473811498

Molecular Weight (calculated)

23264.8 Da

IEP (calculated)

5.836

GRAVY (calculated)

-0.145

Length

214 amino acids

Sequence
(BLAST)

001: MAPAVSALAK YKLVFLGDQA VGKTAIITRF MYDKFDATYQ ATIGIDFLSK TMYLEDRTVR LQLWDTAGQE RFRSLIPSYI RDSSVAVIVY DVTDTQSFLH
101: TSKWIDEVNT ARGKDVLIVL VGNKTDLVDQ RQVPTDEGEA KAKEHGALFM ETSAKAGFNI KALFRTIAAS LPGMDALSSA KQEDMVDINL RPASGPAGSG
201: APGQQEQKAG GCSC

Best Arabidopsis Sequence Match ( AT2G44610.1 )
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC

Arabidopsis Description

RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.