CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 4
mitochondrion 2
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0191400-01	Rice	plasma membrane	87.79	86.98
TraesCS4A01G407500.1	Wheat	cytosol	87.32	86.92
TraesCS4D01G305100.1	Wheat	cytosol	86.85	86.45
TraesCS4B01G306900.1	Wheat	cytosol	86.85	86.45
GSMUA_Achr2P22200_001	Banana	cytosol	80.28	82.61
GSMUA_Achr6P10400_001	Banana	cytosol	77.93	80.19
KRH59334	Soybean	endoplasmic reticulum	77.46	79.71
EER97564	Sorghum	cytosol	77.93	79.43
EER97251	Sorghum	cytosol	77.46	79.33
Solyc05g051570.2.1	Tomato	nucleus	77.0	79.23
PGSC0003DMT400018619	Potato	cytosol	77.0	79.23
KRH43179	Soybean	cytosol	77.0	79.23
AT5G10260.1	Thale cress	cytosol	76.53	78.74
Solyc03g078570.2.1	Tomato	cytosol	76.53	78.74
PGSC0003DMT400056111	Potato	cytosol	76.53	78.74
KRG97576	Soybean	cytosol	76.53	78.74
KRH31293	Soybean	cytosol	65.26	78.09
VIT_00s0665g00040.t01	Wine grape	extracellular	64.79	77.53
CDY13772	Canola	cytosol	75.12	77.29
Bra006054.1-P	Field mustard	cytosol	75.12	77.29
Bra038535.1-P	Field mustard	cytosol	75.12	77.29
CDX78373	Canola	cytosol	75.12	77.29
CDX81166	Canola	cytosol	75.12	77.29
Zm00001d028012_P001	Maize	cytosol, extracellular	80.28	77.03
CDX69850	Canola	cytosol	74.18	76.7
Bra009046.1-P	Field mustard	cytosol	74.18	76.7
CDX96987	Canola	cytosol	74.18	76.7
AT2G22290.1	Thale cress	cytosol	74.18	76.33
HORVU4Hr1G078690.2	Barley	plastid	85.92	59.61
CDX76936	Canola	cytosol	72.3	56.0
EER93694	Sorghum	cytosol	36.62	38.42
KXG24102	Sorghum	cytosol	36.15	37.75
OQU93218	Sorghum	plastid	33.8	36.0
KXG20675	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.8	36.0

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	UniProt:A0A1B6QQ00	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlants:KXG39985	ProteinID:KXG39985
ProteinID:KXG39985.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF630	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	EnsemblPlantsGene:SORBI_3001G474200
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0001C80BA9	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:74623787..74626050

Molecular Weight (calculated)

23249.7 Da

IEP (calculated)

6.536

GRAVY (calculated)

-0.119

Length

213 amino acids

Sequence
(BLAST)

001: MAVVSALAKY KLVFLGDQAV GKTAIITRFM YDKFDDTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VTDSQSFLNT
101: SKWIEEVNTQ RGGDVLIFLV GNKTDLVDKR KVTTGEGEAK AQEHGAMFIE TSAKAGFNVK PLFRKIAGSL PGLDALSSAK HEDMVDINLR PASGSSASGA
201: VAQLEQKSGG CSC

Best Arabidopsis Sequence Match ( AT2G44610.1 )
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC

Arabidopsis Description

RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.