Factsheet for AT5G10260.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96987	Canola	cytosol	92.27	92.72
CDX69850	Canola	cytosol	91.79	92.23
Bra009046.1-P	Field mustard	cytosol	91.79	92.23
CDX81166	Canola	cytosol	91.3	91.3
CDX78373	Canola	cytosol	91.3	91.3
Bra006054.1-P	Field mustard	cytosol	91.3	91.3
AT2G22290.1	Thale cress	cytosol	89.37	89.37
AT2G44610.1	Thale cress	cytosol	87.92	87.5
GSMUA_Achr2P22200_001	Banana	cytosol	87.44	87.44
GSMUA_Achr6P10400_001	Banana	cytosol	87.44	87.44
Zm00001d006905_P001	Maize	mitochondrion	87.44	86.6
EER97564	Sorghum	cytosol	86.96	86.12
AT4G39890.1	Thale cress	cytosol	85.02	82.24
Os03t0191400-01	Rice	plasma membrane	81.16	78.14
KXG39985	Sorghum	cytosol	78.74	76.53
TraesCS4A01G407500.1	Wheat	cytosol	78.26	75.7
TraesCS4D01G305100.1	Wheat	cytosol	78.26	75.7
TraesCS4B01G306900.1	Wheat	cytosol	77.29	74.77
AT5G64990.2	Thale cress	cytosol	76.33	74.18
Zm00001d028012_P001	Maize	cytosol, extracellular	66.67	62.16
HORVU4Hr1G078690.2	Barley	plastid	77.29	52.12
AT3G54840.1	Thale cress	cytosol	39.13	40.1
AT4G19640.1	Thale cress	cytosol	37.68	39.0
AT5G45130.2	Thale cress	endoplasmic reticulum	36.23	36.06

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	EntrezGene:830890	UniProt:A0A178UPG4	ProteinID:AED91514.1	ArrayExpress:AT5G10260
EnsemblPlantsGene:AT5G10260	RefSeq:AT5G10260	TAIR:AT5G10260	RefSeq:AT5G10260-TAIR-G	EnsemblPlants:AT5G10260.1	TAIR:AT5G10260.1
Symbol:AtRABH1e	EMBL:BT020541	EMBL:BT024829	ProteinID:CAB96682.1	GO:GO:0000139	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0006810
GO:GO:0006890	GO:GO:0006891	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192
GO:GO:0016787	GO:GO:0042147	RefSeq:NP_196588.3	ProteinID:OAO95759.1	InterPro:P-loop_NTPase	PFAM:PF00071
PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001185	PO:PO:0007103
PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009009	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0020038
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF630	UniProt:Q9LFT9	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00000A2528

Description

RABH1ERABH1e [Source:UniProtKB/TrEMBL;Acc:A0A178UPG4]

Coordinates

chr5:+:3219677..3221515

Molecular Weight (calculated)

23134.6 Da

IEP (calculated)

8.158

GRAVY (calculated)

-0.246

Length

207 amino acids

Sequence
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VANRQSFLNT
101: SKWIEDVRTE RGSDVIIVLV GNKTDLVDKR QVSIEEGDNK ARDYGVIFIE TSAKAGFNIK PLFRKIAAAL PGMETLSSTK QEDMVDVNLK TSSNSAQGEQ
201: QRGGCAC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.