Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014785.1-P | Field mustard | cytosol, plastid | 92.57 | 93.97 |
| CDY55834 | Canola | cytosol, plastid | 93.56 | 93.1 |
| CDX78272 | Canola | cytosol | 93.07 | 92.61 |
| CDY61658 | Canola | cytosol | 91.09 | 91.09 |
| VIT_13s0019g04680.t01 | Wine grape | cytosol | 88.12 | 89.0 |
| KRG91957 | Soybean | cytosol | 85.64 | 86.5 |
| Solyc11g008430.1.1 | Tomato | cytosol | 85.15 | 86.0 |
| PGSC0003DMT400019238 | Potato | cytosol | 85.15 | 86.0 |
| GSMUA_Achr1P03160_001 | Banana | cytosol | 72.77 | 83.52 |
| TraesCS4D01G267900.1 | Wheat | cytosol | 68.81 | 83.23 |
| TraesCS1A01G140700.1 | Wheat | cytosol | 62.87 | 83.01 |
| KRH34819 | Soybean | cytosol | 83.17 | 81.95 |
| Os03t0151900-01 | Rice | plasma membrane | 76.73 | 77.89 |
| TraesCS4A01G035800.1 | Wheat | plastid | 76.24 | 77.39 |
| TraesCS4B01G268600.1 | Wheat | plastid | 76.24 | 77.39 |
| TraesCS1B01G157100.1 | Wheat | cytosol, plastid | 76.24 | 77.0 |
| OQU93218 | Sorghum | plastid | 76.24 | 77.0 |
| GSMUA_Achr5P10670_001 | Banana | cytosol | 73.27 | 76.68 |
| TraesCS1D01G139500.1 | Wheat | cytosol, plastid | 75.74 | 76.5 |
| GSMUA_Achr4P29310_001 | Banana | plastid | 77.23 | 71.23 |
| Zm00001d048410_P004 | Maize | plastid | 74.75 | 71.23 |
| Bra007104.1-P | Field mustard | endoplasmic reticulum | 91.58 | 66.55 |
| Os10t0441800-01 | Rice | plasma membrane | 79.21 | 64.0 |
| CDY02896 | Canola | endoplasmic reticulum, golgi | 80.69 | 60.59 |
| HORVU4Hr1G072020.1 | Barley | cytosol | 75.25 | 58.46 |
| AT4G19640.1 | Thale cress | cytosol | 49.51 | 50.0 |
| AT5G45130.2 | Thale cress | endoplasmic reticulum | 49.51 | 48.08 |
| AT2G44610.1 | Thale cress | cytosol | 40.59 | 39.42 |
| AT5G10260.1 | Thale cress | cytosol | 40.1 | 39.13 |
| AT2G22290.1 | Thale cress | cytosol | 39.11 | 38.16 |
| AT5G64990.2 | Thale cress | cytosol | 38.12 | 36.15 |
| AT4G39890.1 | Thale cress | cytosol | 37.62 | 35.51 |
Protein Annotations
| MapMan:22.8.1.6 | Gene3D:3.40.50.300 | EntrezGene:824649 | UniProt:A0A178VAL4 | EMBL:AB007766 | ProteinID:AEE79298.1 |
| ProteinID:AEE79299.1 | EMBL:AK316975 | Symbol:ARA6 | ArrayExpress:AT3G54840 | EnsemblPlantsGene:AT3G54840 | RefSeq:AT3G54840 |
| TAIR:AT3G54840 | RefSeq:AT3G54840-TAIR-G | EnsemblPlants:AT3G54840.1 | TAIR:AT3G54840.1 | Unigene:At.3115 | EMBL:BT002860 |
| EMBL:BT004392 | ProteinID:CAB41100.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005769 | GO:GO:0005783 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006897 | GO:GO:0008150 | GO:GO:0010008 | GO:GO:0010009 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0031901 | GO:GO:0045022 | RefSeq:NP_001078287.1 | RefSeq:NP_567008.1 | ProteinID:OAP02804.1 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF618 | UniProt:Q9CB01 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI000000BE02 | : | : | : | : |
Description
RABF1Ras-related protein RABF1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CB01]
Coordinates
chr3:+:20318412..20321106
Molecular Weight (calculated)
21890.0 Da
IEP (calculated)
6.536
GRAVY (calculated)
-0.221
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCASSLPDR NSGTLSGLSN SENAVPADAK NLRVKLVLLG DSGVGKSCIV LRFVRGQFDA TSKVTVGASF LSQTIALQDS TTVKFEIWDT AGQERYSALA
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.