Factsheet for TraesCS4B01G306900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G305100.1	Wheat	cytosol	98.6	98.6
TraesCS4A01G407500.1	Wheat	cytosol	97.66	97.66
Os03t0191400-01	Rice	plasma membrane	87.38	86.98
KXG39985	Sorghum	cytosol	86.45	86.85
GSMUA_Achr2P22200_001	Banana	cytosol	78.5	81.16
TraesCS2B01G261200.1	Wheat	cytosol	77.57	79.81
KRH59334	Soybean	endoplasmic reticulum	75.7	78.26
GSMUA_Achr6P10400_001	Banana	cytosol	75.7	78.26
Solyc05g051570.2.1	Tomato	nucleus	75.23	77.78
Solyc03g078570.2.1	Tomato	cytosol	75.23	77.78
PGSC0003DMT400056111	Potato	cytosol	75.23	77.78
PGSC0003DMT400018619	Potato	cytosol	75.23	77.78
KRH43179	Soybean	cytosol	75.23	77.78
AT5G10260.1	Thale cress	cytosol	74.77	77.29
KRG97576	Soybean	cytosol	74.77	77.29
KRH31293	Soybean	cytosol	63.55	76.4
VIT_00s0665g00040.t01	Wine grape	extracellular	63.55	76.4
CDX81166	Canola	cytosol	73.36	75.85
CDX78373	Canola	cytosol	73.36	75.85
Bra006054.1-P	Field mustard	cytosol	73.36	75.85
CDX96987	Canola	cytosol	72.9	75.73
CDX69850	Canola	cytosol	72.9	75.73
Bra009046.1-P	Field mustard	cytosol	72.9	75.73
CDY13772	Canola	cytosol	72.9	75.36
Bra038535.1-P	Field mustard	cytosol	72.9	75.36
AT2G22290.1	Thale cress	cytosol	71.5	73.91
Zm00001d028012_P001	Maize	cytosol, extracellular	73.83	71.17
HORVU4Hr1G078690.2	Barley	plastid	97.2	67.75
CDX76936	Canola	cytosol	70.09	54.55
TraesCS4B01G268600.1	Wheat	plastid	35.51	38.19
TraesCS7B01G345100.1	Wheat	cytosol	36.92	38.16
TraesCS1B01G157100.1	Wheat	cytosol, plastid	35.05	37.5
TraesCS4B01G019100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	35.05	36.59
TraesCS5B01G014400.1	Wheat	plastid	34.58	35.41

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF840	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS4B01G306900
EnsemblPlants:TraesCS4B01G306900.1	TIGR:cd01861	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:+:596372794..596374627

Molecular Weight (calculated)

23332.9 Da

IEP (calculated)

5.836

GRAVY (calculated)

-0.149

Length

214 amino acids

Sequence
(BLAST)

001: MAPVVSALAK YKLVFLGDQA VGKTAIITRF MYDKFDATYQ ATIGIDFLSK TMYLEDRTVR LQLWDTAGQE RFRSLIPSYI RDSSVAVIVY DVTDTQSFLH
101: TSKWIDEVNT ARGKDVLIVL VGNKTDLVDQ RQVPTDEGEA KAKEHGALFM ETSAKAGFNI KALFRTIATS LPGMDALPSA KQEDMVDINL RPASGPAGSG
201: APGQQEQKAG GCSC

Best Arabidopsis Sequence Match ( AT2G22290.1 )
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVVVYD VANRLSFLNT
101: SKWIEEVRNE RAGDVIIVLV GNKTDLVEKR QVSIEEGDSK GREYGVMFIE TSAKAGFNIK PLFRKIAAAL PGMESYSNTK NEDMVDVNLK PTSNSSQGDQ
201: QGGACSC

Arabidopsis Description

RABH1DRas-related protein RABH1d [Source:UniProtKB/Swiss-Prot;Acc:Q9SID8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.