Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 2
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g051570.2.1 | Tomato | nucleus | 99.52 | 99.52 |
| PGSC0003DMT400056111 | Potato | cytosol | 92.27 | 92.27 |
| PGSC0003DMT400004322 | Potato | cytosol | 90.82 | 90.38 |
| GSMUA_Achr6P10400_001 | Banana | cytosol | 89.86 | 89.86 |
| EER97564 | Sorghum | cytosol | 89.86 | 89.0 |
| Zm00001d006905_P001 | Maize | mitochondrion | 89.86 | 89.0 |
| GSMUA_Achr2P22200_001 | Banana | cytosol | 88.89 | 88.89 |
| Os03t0191400-01 | Rice | plasma membrane | 81.64 | 78.6 |
| KXG39985 | Sorghum | cytosol | 79.23 | 77.0 |
| TraesCS4D01G305100.1 | Wheat | cytosol | 78.74 | 76.17 |
| TraesCS4A01G407500.1 | Wheat | cytosol | 78.26 | 75.7 |
| TraesCS4B01G306900.1 | Wheat | cytosol | 77.78 | 75.23 |
| Zm00001d028012_P001 | Maize | cytosol, extracellular | 66.67 | 62.16 |
| HORVU4Hr1G078690.2 | Barley | plastid | 77.78 | 52.44 |
| PGSC0003DMT400019238 | Potato | cytosol | 37.2 | 38.5 |
| PGSC0003DMT400055259 | Potato | cytosol, plastid | 35.75 | 37.0 |
| PGSC0003DMT400050774 | Potato | cytosol | 35.75 | 37.0 |
Protein Annotations
| EntrezGene:102603643 | MapMan:22.8.1.8 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | UniProt:M1AAX8 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | EnsemblPlantsGene:PGSC0003DMG400007223 | PGSC:PGSC0003DMG400007223 | EnsemblPlants:PGSC0003DMT400018619 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF630 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0002959912 | RefSeq:XP_006355553.1 |
Description
GTP-binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007223]
Coordinates
chr5:-:46552959..46557157
Molecular Weight (calculated)
23102.7 Da
IEP (calculated)
6.735
GRAVY (calculated)
-0.168
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVFD VANRQSFLNT
101: SKWIEEVRTE RGTDVIIVLV GNKTDLVEKR QVSIEEGETK AREFNVMFIE TSAKAGFNIK PLFRKIAAAL PGMEALSSTK QEDMVDVNLK PTTSSSNAEQ
201: QGGGCAC
101: SKWIEEVRTE RGTDVIIVLV GNKTDLVEKR QVSIEEGETK AREFNVMFIE TSAKAGFNIK PLFRKIAAAL PGMEALSSTK QEDMVDVNLK PTTSSSNAEQ
201: QGGGCAC
001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VANRQSFLNT
101: SKWIEDVRTE RGSDVIIVLV GNKTDLVDKR QVSIEEGDNK ARDYGVIFIE TSAKAGFNIK PLFRKIAAAL PGMETLSSTK QEDMVDVNLK TSSNSAQGEQ
201: QRGGCAC
101: SKWIEDVRTE RGSDVIIVLV GNKTDLVDKR QVSIEEGDNK ARDYGVIFIE TSAKAGFNIK PLFRKIAAAL PGMETLSSTK QEDMVDVNLK TSSNSAQGEQ
201: QRGGCAC
Arabidopsis Description
RABH1ERABH1e [Source:UniProtKB/TrEMBL;Acc:A0A178UPG4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.