CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
golgi 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0665g00040.t01	Wine grape	extracellular	92.13	92.13
KRG97576	Soybean	cytosol	98.31	84.54
KRH43179	Soybean	cytosol	97.75	84.06
KRH59334	Soybean	endoplasmic reticulum	97.75	84.06
Solyc03g078570.2.1	Tomato	cytosol	93.82	80.68
PGSC0003DMT400056111	Potato	cytosol	93.82	80.68
GSMUA_Achr6P10400_001	Banana	cytosol	89.89	77.29
AT2G22290.1	Thale cress	cytosol	89.33	76.81
GSMUA_Achr2P22200_001	Banana	cytosol	88.76	76.33
KRH77258	Soybean	endoplasmic reticulum	87.64	75.36
KRH28235	Soybean	cytosol	87.64	75.36
CDY13772	Canola	cytosol	87.08	74.88
Bra038535.1-P	Field mustard	cytosol	87.08	74.88
KRH04283	Soybean	cytosol	84.83	73.3
KRH57563	Soybean	cytosol	84.83	73.3
EER97564	Sorghum	cytosol	85.39	72.73
Zm00001d006905_P001	Maize	mitochondrion	85.39	72.73
KRH77257	Soybean	endoplasmic reticulum	69.1	69.89
Os03t0191400-01	Rice	plasma membrane	80.9	66.98
KXG39985	Sorghum	cytosol	78.09	65.26
TraesCS4D01G305100.1	Wheat	cytosol	77.53	64.49
TraesCS4A01G407500.1	Wheat	cytosol	76.97	64.02
TraesCS4B01G306900.1	Wheat	cytosol	76.4	63.55
Zm00001d028012_P001	Maize	cytosol, extracellular	65.17	52.25
CDX76936	Canola	cytosol	79.21	51.27
HORVU4Hr1G078690.2	Barley	plastid	76.4	44.3
KRG91957	Soybean	cytosol	36.52	32.5
KRH41580	Soybean	cytosol	34.27	31.44
KRH34819	Soybean	cytosol	35.96	31.22
KRH60288	Soybean	mitochondrion	34.83	31.16
KRH09851	Soybean	cytosol, mitochondrion, plastid	34.83	31.0
KRG98019	Soybean	cytosol	34.83	31.0
KRH20053	Soybean	endoplasmic reticulum	34.83	26.61
KRH23467	Soybean	cytosol	16.29	25.89
KRH28236	Soybean	cytosol	66.29	24.89

Protein Annotations

EntrezGene:100809676	MapMan:22.8.1.8	Gene3D:3.40.50.300	EMBL:ACUP02007137	EnsemblPlantsGene:GLYMA_11G240300	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0006810
GO:GO:0006890	GO:GO:0006891	GO:GO:0008150	GO:GO:0016787	GO:GO:0042147	UniProt:I1LNK6
EnsemblPlants:KRH31293	ProteinID:KRH31293	ProteinID:KRH31293.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF630	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00023CBE8B

Description

hypothetical protein

Coordinates

chr11:+:33465342..33469812

Molecular Weight (calculated)

20004.7 Da

IEP (calculated)

4.886

GRAVY (calculated)

-0.367

Length

178 amino acids

Sequence
(BLAST)

001: MYDKFDTNYQ ATIGIDFLSK TMYLEDRTVR LQLWDTAGQE RFRSLIPSYI RDSSVAVIVY DVANRQSFLN TNKWIEEVRT ERGSDVIIVL VGNKTDLVEK
101: RQVSIEEGDA KSRESGIMFI ETSAKAGFNI KPLFRKIAAA LPGMETLSST KQEDMVDVNL KPTVNSSQTE QQGGGCSC

Best Arabidopsis Sequence Match ( AT2G22290.1 )
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVVVYD VANRLSFLNT
101: SKWIEEVRNE RAGDVIIVLV GNKTDLVEKR QVSIEEGDSK GREYGVMFIE TSAKAGFNIK PLFRKIAAAL PGMESYSNTK NEDMVDVNLK PTSNSSQGDQ
201: QGGACSC

Arabidopsis Description

RABH1DRas-related protein RABH1d [Source:UniProtKB/Swiss-Prot;Acc:Q9SID8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.