CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P00610_001	Banana	cytosol	26.79	70.95
KRH77257	Soybean	endoplasmic reticulum	25.11	67.61
KRH31293	Soybean	cytosol	24.89	66.29
KRH57563	Soybean	cytosol	28.27	65.05
KRH04283	Soybean	cytosol	28.27	65.05
KRH28235	Soybean	cytosol	27.0	61.84
KRH77258	Soybean	endoplasmic reticulum	26.79	61.35
GSMUA_AchrUn_...	Banana	cytosol	26.37	60.1
GSMUA_Achr5P12680_001	Banana	plasma membrane	26.37	60.1
Zm00001d006433_P001	Maize	plasma membrane	26.16	59.62
EER97251	Sorghum	cytosol	26.16	59.62
TraesCS2D01G234600.1	Wheat	plastid	25.95	59.13
HORVU2Hr1G050270.2	Barley	cytosol	25.95	59.13
TraesCS2B01G261200.1	Wheat	cytosol	25.95	59.13
TraesCS2A01G236600.1	Wheat	cytosol	25.95	59.13
Os07t0496000-01	Rice	plasma membrane	25.95	59.13
KRH59334	Soybean	endoplasmic reticulum	24.89	57.0
VIT_02s0012g00790.t01	Wine grape	cytosol	13.92	56.9
KRG97576	Soybean	cytosol	24.68	56.52
KRH43179	Soybean	cytosol	24.68	56.52
Zm00001d021551_P002	Maize	cytosol	25.95	48.43
Zm00001d024612_P011	Maize	mitochondrion	13.92	22.92
KRG91957	Soybean	cytosol	9.49	22.5
KRH09851	Soybean	cytosol, mitochondrion, plastid	8.86	21.0
KRG98019	Soybean	cytosol	8.86	21.0
KRH34819	Soybean	cytosol	9.07	20.98
KRH41580	Soybean	cytosol	8.44	20.62
KRH60288	Soybean	mitochondrion	8.44	20.1
KRH20053	Soybean	endoplasmic reticulum	8.86	18.03
KRH23467	Soybean	cytosol	2.53	10.71

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0HBU8	EMBL:ACUP02006741	EnsemblPlantsGene:GLYMA_11G040500	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
InterPro:GTP_binding_domain	EnsemblPlants:KRH28236	ProteinID:KRH28236	ProteinID:KRH28236.1	InterPro:P-loop_NTPase	PFAM:PF00071
PFAM:PF01926	PRINTS:PR00326	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF840	SMART:SM00173
SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI0006EDAC93	SEG:seg

Description

hypothetical protein

Coordinates

chr11:+:2972500..2977833

Molecular Weight (calculated)

52577.4 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.304

Length

474 amino acids

Sequence
(BLAST)

001: MYDKFDNTYQ FTVHITNLRP QLVLIFFYQK PLYVEDRTVR LQLCFITSSV KNCCVLVNQR TQLDRKDLEV LFQATLGTHL LLYVIAYDVA SRQTFLNTSR
101: WIEEVRIERG SDAIIVHVGN KTDLVNKRQV STEEGEAKSR ELNVMFIEAS AKAGFNIKAL FRKIAAALPG METLSSTKQE DMVDVDLRSF GGYQSQPQSG
201: GSATTAPLNC SATRLVVALE DKATVIKHTE AFTQRCISRW SVTLYARYSD IPQNKSKLAP LQRRMVDQCK MFAKAGDGGN GCSILRKGRS DVWDFSGLQH
301: HLCYKFPVKA IRITWCSSSQ DEETDVKKSE KSRQVASTDV FSQLSTSNGA PEFGTEDIGE KQEILYNVAE LTEEGQQIVI AHGGEGGLGN VSCSKDSRKP
401: VTVQDPDSDL SSLHADYDDL SITVADIPGL IKGAHQNHGL GHAFLGNTKC TKVLAYVVDL AAALNGREFH HGNS

Best Arabidopsis Sequence Match ( AT2G22290.1 )
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVVVYD VANRLSFLNT
101: SKWIEEVRNE RAGDVIIVLV GNKTDLVEKR QVSIEEGDSK GREYGVMFIE TSAKAGFNIK PLFRKIAAAL PGMESYSNTK NEDMVDVNLK PTSNSSQGDQ
201: QGGACSC

Arabidopsis Description

RABH1DRas-related protein RABH1d [Source:UniProtKB/Swiss-Prot;Acc:Q9SID8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.