CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57563	Soybean	cytosol	100.0	100.0
KRH77258	Soybean	endoplasmic reticulum	92.23	91.79
KRH28235	Soybean	cytosol	92.23	91.79
GSMUA_AchrUn_...	Banana	cytosol	91.26	90.38
GSMUA_Achr1P00610_001	Banana	cytosol	78.16	89.94
TraesCS2A01G236600.1	Wheat	cytosol	90.78	89.9
Os07t0496000-01	Rice	plasma membrane	90.78	89.9
TraesCS2B01G261200.1	Wheat	cytosol	90.78	89.9
EER97251	Sorghum	cytosol	90.78	89.9
TraesCS2D01G234600.1	Wheat	plastid	90.78	89.9
Zm00001d006433_P001	Maize	plasma membrane	90.78	89.9
HORVU2Hr1G050270.2	Barley	cytosol	90.78	89.9
GSMUA_Achr5P12680_001	Banana	plasma membrane	90.78	89.9
KRH59334	Soybean	endoplasmic reticulum	86.89	86.47
KRG97576	Soybean	cytosol	85.92	85.51
KRH43179	Soybean	cytosol	85.92	85.51
KRH31293	Soybean	cytosol	73.3	84.83
KRH77257	Soybean	endoplasmic reticulum	69.9	81.82
Zm00001d021551_P002	Maize	cytosol	90.29	73.23
KRH23467	Soybean	cytosol	22.33	41.07
KRH09851	Soybean	cytosol, mitochondrion, plastid	38.35	39.5
KRG91957	Soybean	cytosol	38.35	39.5
KRH60288	Soybean	mitochondrion	36.41	37.69
KRH34819	Soybean	cytosol	37.38	37.56
KRG98019	Soybean	cytosol	35.92	37.0
KRH41580	Soybean	cytosol	33.98	36.08
KRH20053	Soybean	endoplasmic reticulum	35.92	31.76
KRH28236	Soybean	cytosol	65.05	28.27
Zm00001d024612_P011	Maize	mitochondrion	39.32	28.12

Protein Annotations

EntrezGene:100527651	EntrezGene:100790511	MapMan:22.8.1.8	Gene3D:3.40.50.300	UniProt:A0A0R0JYU2	EMBL:ACUP02002857
EMBL:ACUP02010395	EnsemblPlantsGene:GLYMA_17G151600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlants:KRH04283	ProteinID:KRH04283	ProteinID:KRH04283.1
ProteinID:KRH57563.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF840	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00019AA8EC	:	:

Description

hypothetical protein

Coordinates

chr17:+:12632103..12637611

Molecular Weight (calculated)

22944.4 Da

IEP (calculated)

7.257

GRAVY (calculated)

-0.219

Length

206 amino acids

Sequence
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQTFLNT
101: SKWIEEVRSE RGSDVIVVLV GNKTDLVDKR QVSTEEGEAK SRELNVMFIE ASAKAGFNIK ALFRKIAAAL PGMETLSTTK QEDMVDVNLR SSGSHDSQPQ
201: SGGCSC

Best Arabidopsis Sequence Match ( AT2G44610.1 )
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC

Arabidopsis Description

RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.