CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 3
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77258	Soybean	endoplasmic reticulum	98.55	98.55
Solyc01g088560.2.1	Tomato	plastid	95.17	94.71
PGSC0003DMT400004322	Potato	cytosol	94.69	94.23
VIT_02s0012g00710.t01	Wine grape	cytosol	80.68	93.3
KRH57563	Soybean	cytosol	91.79	92.23
KRH04283	Soybean	cytosol	91.79	92.23
GSMUA_AchrUn_...	Banana	cytosol	92.27	91.83
TraesCS2A01G236600.1	Wheat	cytosol	91.79	91.35
TraesCS2B01G261200.1	Wheat	cytosol	91.79	91.35
TraesCS2D01G234600.1	Wheat	plastid	91.79	91.35
Os07t0496000-01	Rice	plasma membrane	91.79	91.35
HORVU2Hr1G050270.2	Barley	cytosol	91.79	91.35
GSMUA_Achr5P12680_001	Banana	plasma membrane	91.79	91.35
GSMUA_Achr1P00610_001	Banana	cytosol	78.74	91.06
Zm00001d006433_P001	Maize	plasma membrane	91.3	90.87
EER97251	Sorghum	cytosol	91.3	90.87
KRG97576	Soybean	cytosol	87.92	87.92
KRH43179	Soybean	cytosol	87.92	87.92
KRH59334	Soybean	endoplasmic reticulum	87.92	87.92
KRH31293	Soybean	cytosol	75.36	87.64
KRH77257	Soybean	endoplasmic reticulum	66.67	78.41
Zm00001d021551_P002	Maize	cytosol	90.82	74.02
AT5G64990.2	Thale cress	cytosol	74.88	72.77
CDX81264	Canola	cytosol	71.01	72.06
Bra037802.1-P	Field mustard	cytosol	66.18	69.54
CDY18689	Canola	cytosol	71.5	68.2
KRG91957	Soybean	cytosol	39.61	41.0
KRH23467	Soybean	cytosol	21.74	40.18
KRH09851	Soybean	cytosol, mitochondrion, plastid	38.65	40.0
KRH34819	Soybean	cytosol	39.13	39.51
KRH60288	Soybean	mitochondrion	37.2	38.69
KRG98019	Soybean	cytosol	36.72	38.0
KRH41580	Soybean	cytosol	34.78	37.11
KRH20053	Soybean	endoplasmic reticulum	36.72	32.62
Zm00001d024612_P011	Maize	mitochondrion	38.65	27.78
KRH28236	Soybean	cytosol	61.84	27.0

Protein Annotations

EntrezGene:100795325	MapMan:22.8.1.8	Gene3D:3.40.50.300	UniProt:A0A0R4J4A9	EMBL:ACUP02006741	EnsemblPlantsGene:GLYMA_11G040400
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlants:KRH28235	ProteinID:KRH28235	ProteinID:KRH28235.1	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF840	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI00019AA8F8	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:2967679..2971565

Molecular Weight (calculated)

23003.6 Da

IEP (calculated)

8.164

GRAVY (calculated)

-0.141

Length

207 amino acids

Sequence
(BLAST)

001: MASVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQTFLNT
101: AKWIEEVRTE RGSDVIIVLV GNKTDLVEKR QVSIEEGEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSAK QEDMVDVNLK STNGSAQSQP
201: QSSGCAC

Best Arabidopsis Sequence Match ( AT2G44610.1 )
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC

Arabidopsis Description

RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.