CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006433_P001	Maize	plasma membrane	100.0	100.0
TraesCS2B01G261200.1	Wheat	cytosol	99.04	99.04
Os07t0496000-01	Rice	plasma membrane	99.04	99.04
TraesCS2A01G236600.1	Wheat	cytosol	99.04	99.04
HORVU2Hr1G050270.2	Barley	cytosol	99.04	99.04
TraesCS2D01G234600.1	Wheat	plastid	99.04	99.04
GSMUA_AchrUn_...	Banana	cytosol	95.19	95.19
VIT_15s0021g00640.t01	Wine grape	cytosol	81.25	94.41
GSMUA_Achr1P00610_001	Banana	cytosol	80.77	93.85
GSMUA_Achr5P12680_001	Banana	plasma membrane	93.27	93.27
PGSC0003DMT400004322	Potato	cytosol	93.27	93.27
Solyc01g088560.2.1	Tomato	plastid	93.27	93.27
VIT_02s0012g00710.t01	Wine grape	cytosol	79.33	92.18
CDY30479	Canola	cytosol	91.83	91.83
CDY48241	Canola	cytosol	91.83	91.83
Bra037641.1-P	Field mustard	cytosol	91.83	91.83
CDX74672	Canola	cytosol	91.83	91.83
CDX95606	Canola	cytosol	91.83	91.83
CDX83425	Canola	cytosol	91.83	91.83
AT2G44610.1	Thale cress	cytosol	91.83	91.83
KRH77258	Soybean	endoplasmic reticulum	91.35	91.79
Bra004850.1-P	Field mustard	cytosol	91.35	91.35
KRH28235	Soybean	cytosol	90.87	91.3
Bra000355.1-P	Field mustard	cytosol	90.87	90.87
KRH04283	Soybean	cytosol	89.9	90.78
KRH57563	Soybean	cytosol	89.9	90.78
EER97564	Sorghum	cytosol	88.46	88.04
Zm00001d021551_P002	Maize	cytosol	99.52	81.5
KXG39985	Sorghum	cytosol	79.33	77.46
KRH77257	Soybean	endoplasmic reticulum	63.94	75.57
CDX81264	Canola	cytosol	72.12	73.53
AT5G64990.2	Thale cress	cytosol	74.52	72.77
Bra037802.1-P	Field mustard	cytosol	67.79	71.57
CDY18689	Canola	cytosol	72.6	69.59
VIT_02s0012g00790.t01	Wine grape	cytosol	29.33	52.59
OQU93218	Sorghum	plastid	36.06	37.5
EER93694	Sorghum	cytosol	36.06	36.95
KXG20675	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.62	36.0
KXG24102	Sorghum	cytosol	35.1	35.78
CDY23446	Canola	cytosol	91.35	31.61
KRH28236	Soybean	cytosol	59.62	26.16

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	EntrezGene:8080712	UniProt:C5X999	EnsemblPlants:EER97251	ProteinID:EER97251
ProteinID:EER97251.1	GO:GO:0000139	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005773	GO:GO:0005774	GO:GO:0005794	GO:GO:0005802	GO:GO:0005829
GO:GO:0005886	GO:GO:0006810	GO:GO:0006890	GO:GO:0006891	GO:GO:0008150	GO:GO:0009506
GO:GO:0016020	GO:GO:0016787	GO:GO:0042147	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF840	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	EnsemblPlantsGene:SORBI_3002G309500	SUPFAM:SSF52540	unigene:Sbi.1735	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI00017B77BF	RefSeq:XP_002460730.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:68363268..68366819

Molecular Weight (calculated)

22944.5 Da

IEP (calculated)

8.171

GRAVY (calculated)

-0.132

Length

208 amino acids

Sequence
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVFD VASRQSFLNT
101: SKWIEEVRTE RGSDVIIVLV GNKTDLVDKR QVSIEEGEGK AKDLGVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSAK QEDMVDVNLR SGNANSSQSQ
201: AQAGGCSC

Best Arabidopsis Sequence Match ( AT2G44610.1 )
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC

Arabidopsis Description

RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.