Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0012g00710.t01 | Wine grape | cytosol | 57.76 | 37.43 |
| VIT_15s0021g00640.t01 | Wine grape | cytosol | 56.03 | 36.31 |
| KRH77257 | Soybean | endoplasmic reticulum | 51.72 | 34.09 |
| GSMUA_Achr1P00610_001 | Banana | cytosol | 51.72 | 33.52 |
| VIT_00s0665g00040.t01 | Wine grape | extracellular | 50.86 | 33.15 |
| TraesCS2D01G234600.1 | Wheat | plastid | 53.45 | 29.81 |
| TraesCS2B01G261200.1 | Wheat | cytosol | 53.45 | 29.81 |
| TraesCS2A01G236600.1 | Wheat | cytosol | 53.45 | 29.81 |
| Os07t0496000-01 | Rice | plasma membrane | 53.45 | 29.81 |
| HORVU2Hr1G050270.2 | Barley | cytosol | 53.45 | 29.81 |
| EER97251 | Sorghum | cytosol | 52.59 | 29.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.59 | 29.33 |
| GSMUA_Achr5P12680_001 | Banana | plasma membrane | 52.59 | 29.33 |
| Zm00001d006433_P001 | Maize | plasma membrane | 52.59 | 29.33 |
| Zm00001d021551_P002 | Maize | cytosol | 52.59 | 24.02 |
| Zm00001d024612_P011 | Maize | mitochondrion | 39.66 | 15.97 |
| KRH28236 | Soybean | cytosol | 56.9 | 13.92 |
| VIT_09s0002g04600.t01 | Wine grape | cytosol | 19.83 | 11.56 |
| VIT_13s0019g04680.t01 | Wine grape | cytosol | 18.97 | 11.0 |
| VIT_11s0016g04020.t01 | Wine grape | cytosol | 15.52 | 10.4 |
| VIT_04s0079g00760.t01 | Wine grape | cytosol | 16.38 | 8.3 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | ProteinID:CBI33928 | ProteinID:CBI33928.3 | UniProt:D7TU13 | EMBL:FN596247 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005829 |
| GO:GO:0006810 | GO:GO:0006890 | GO:GO:0006891 | GO:GO:0008150 | GO:GO:0016787 | GO:GO:0042147 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF840 | SUPFAM:SSF52540 | InterPro:Small_GTPase |
| UniParc:UPI0001BE4539 | ArrayExpress:VIT_02s0012g00790 | EnsemblPlantsGene:VIT_02s0012g00790 | EnsemblPlants:VIT_02s0012g00790.t01 | : | : |
Description
No Description!
Coordinates
chr2:-:6680635..6681662
Molecular Weight (calculated)
12785.5 Da
IEP (calculated)
5.147
GRAVY (calculated)
-0.166
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHVSDIKLI RTDTTLDLSQ KAEKAHWQVS IEEGEAKARE LNIMFIDTSA KAGFNIKALF QKIAALPGME TLSSAKQEDM VDVNLKSPSL KQVDALVDTM
101: VPQSLAIYKP NLTPDL
101: VPQSLAIYKP NLTPDL
001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC
Arabidopsis Description
RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.