Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60288 | Soybean | mitochondrion | 80.92 | 70.35 |
| VIT_09s0002g04600.t01 | Wine grape | cytosol | 76.88 | 66.83 |
| KRH41580 | Soybean | cytosol | 74.57 | 66.49 |
| KXG20675 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.36 | 60.0 |
| TraesCS7B01G345100.1 | Wheat | cytosol | 69.94 | 58.45 |
| TraesCS7D01G433800.1 | Wheat | cytosol | 69.36 | 57.69 |
| Os06t0687100-01 | Rice | cytosol | 65.9 | 57.0 |
| HORVU2Hr1G027490.2 | Barley | cytosol, mitochondrion, nucleus | 61.85 | 56.91 |
| VIT_04s0079g00760.t01 | Wine grape | cytosol | 72.25 | 54.59 |
| HORVU1Hr1G013720.3 | Barley | cytosol, mitochondrion, nucleus | 62.43 | 53.2 |
| HORVU7Hr1G101140.7 | Barley | mitochondrion | 65.32 | 52.07 |
| VIT_13s0019g04680.t01 | Wine grape | cytosol | 57.23 | 49.5 |
| VIT_02s0012g00710.t01 | Wine grape | cytosol | 32.37 | 31.28 |
| VIT_15s0021g00640.t01 | Wine grape | cytosol | 31.79 | 30.73 |
| VIT_00s0665g00040.t01 | Wine grape | extracellular | 31.21 | 30.34 |
| VIT_02s0012g00790.t01 | Wine grape | cytosol | 10.4 | 15.52 |
Protein Annotations
| EntrezGene:100259459 | wikigene:100259459 | MapMan:22.8.1.6 | Gene3D:3.40.50.300 | ProteinID:CCB51520 | ProteinID:CCB51520.1 |
| UniProt:F6HH24 | EMBL:FN595756 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0016787 | GO:GO:0030139 | EntrezGene:LOC100259459 | wikigene:LOC100259459 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF683 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGR:TC57382 | TIGRFAMs:TIGR00231 | UniParc:UPI0002108A88 | ArrayExpress:VIT_11s0016g04020 | EnsemblPlantsGene:VIT_11s0016g04020 | EnsemblPlants:VIT_11s0016g04020.t01 |
| RefSeq:XP_002284542 | RefSeq:XP_002284542.1 | RefSeq:XP_003633124 | RefSeq:XP_003633124.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr11:-:3271684..3276160
Molecular Weight (calculated)
19503.4 Da
IEP (calculated)
5.323
GRAVY (calculated)
-0.203
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MARTGNKNIQ AKLVLLGDMG TGKTSLVLRF VKGQFYDFQE STIGAAFFTQ VLSLNEATIK FDIWDTAGQE RYHSLAPMYY RGAAAAVVVY DITSMDSFER
101: AKKWVQELQR QGNPNLLMIL VANKADLETK REVENEKGEQ YAKENGLLFF ETSAKTAQNV NELFYEIGIL IVP
101: AKKWVQELQR QGNPNLLMIL VANKADLETK REVENEKGEQ YAKENGLLFF ETSAKTAQNV NELFYEIGIL IVP
001: MASSGNKNIN AKLVLLGDVG AGKSSLVLRF VKDQFVEFQE STIGAAFFSQ TLAVNDATVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVF DITNQASFER
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAEI YAQENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPAENP TGMVLPNGPG ATAVSSSCCA
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAEI YAQENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPAENP TGMVLPNGPG ATAVSSSCCA
Arabidopsis Description
ATRAB5ARAB homolog 1 [Source:TAIR;Acc:AT5G45130]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.