Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 3
- golgi 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
27664331
|
msms PMID:
27664331
doi
Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31293 | Soybean | cytosol | 92.13 | 92.13 |
| VIT_15s0021g00640.t01 | Wine grape | cytosol | 87.64 | 87.15 |
| VIT_02s0012g00710.t01 | Wine grape | cytosol | 85.96 | 85.47 |
| KRH59334 | Soybean | endoplasmic reticulum | 93.26 | 80.19 |
| KRH43179 | Soybean | cytosol | 92.13 | 79.23 |
| Solyc03g078570.2.1 | Tomato | cytosol | 91.57 | 78.74 |
| PGSC0003DMT400056111 | Potato | cytosol | 91.57 | 78.74 |
| KRG97576 | Soybean | cytosol | 91.01 | 78.26 |
| GSMUA_Achr6P10400_001 | Banana | cytosol | 88.76 | 76.33 |
| GSMUA_Achr2P22200_001 | Banana | cytosol | 87.08 | 74.88 |
| AT2G22290.1 | Thale cress | cytosol | 86.52 | 74.4 |
| Bra038535.1-P | Field mustard | cytosol | 85.96 | 73.91 |
| CDY13772 | Canola | cytosol | 85.96 | 73.91 |
| EER97564 | Sorghum | cytosol | 85.39 | 72.73 |
| Zm00001d006905_P001 | Maize | mitochondrion | 85.39 | 72.73 |
| Os03t0191400-01 | Rice | plasma membrane | 80.34 | 66.51 |
| KXG39985 | Sorghum | cytosol | 77.53 | 64.79 |
| TraesCS4A01G407500.1 | Wheat | cytosol | 76.97 | 64.02 |
| TraesCS4D01G305100.1 | Wheat | cytosol | 76.97 | 64.02 |
| TraesCS4B01G306900.1 | Wheat | cytosol | 76.4 | 63.55 |
| CDX76936 | Canola | cytosol | 79.21 | 51.27 |
| VIT_02s0012g00790.t01 | Wine grape | cytosol | 33.15 | 50.86 |
| Zm00001d028012_P001 | Maize | cytosol, extracellular | 62.92 | 50.45 |
| HORVU4Hr1G078690.2 | Barley | plastid | 75.84 | 43.97 |
| VIT_13s0019g04680.t01 | Wine grape | cytosol | 35.39 | 31.5 |
| VIT_11s0016g04020.t01 | Wine grape | cytosol | 30.34 | 31.21 |
| VIT_09s0002g04600.t01 | Wine grape | cytosol | 34.83 | 31.16 |
| VIT_04s0079g00760.t01 | Wine grape | cytosol | 32.58 | 25.33 |
Protein Annotations
| EntrezGene:100264362 | wikigene:100264362 | MapMan:22.8.1.8 | Gene3D:3.40.50.300 | ProteinID:CBI25776 | ProteinID:CBI25776.3 |
| UniProt:D7T5J3 | EMBL:FN595529 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005829 | GO:GO:0006810 | GO:GO:0006890 | GO:GO:0006891 | GO:GO:0008150 |
| GO:GO:0016787 | GO:GO:0042147 | EntrezGene:LOC100264362 | wikigene:LOC100264362 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF630 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI0001BE2CF5 | ArrayExpress:VIT_00s0665g00040 | EnsemblPlantsGene:VIT_00s0665g00040 | EnsemblPlants:VIT_00s0665g00040.t01 | RefSeq:XP_002271220 | RefSeq:XP_002271220.2 |
Description
No Description!
Coordinates
chrUn:-:33827371..33830799
Molecular Weight (calculated)
19982.7 Da
IEP (calculated)
4.870
GRAVY (calculated)
-0.329
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MYDKFDATYQ ATIGIDFLSK TMYLEDRTIR LQLWDTAGQE RFRSLIPSYI RDSSVAVIVY DVGNRQSFLN TSKWIEEVRT ERGTDVIIVL VGNKTDLVDK
101: RQVSIEEGDT KSRDFGVMFI ETSAKAGFNI KPLFRKIASA LPGMETLSST KQEDMVDVNL KPSVNSSQTE QQGGGCAC
101: RQVSIEEGDT KSRDFGVMFI ETSAKAGFNI KPLFRKIASA LPGMETLSST KQEDMVDVNL KPSVNSSQTE QQGGGCAC
001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VANRQSFLNT
101: SKWIEDVRTE RGSDVIIVLV GNKTDLVDKR QVSIEEGDNK ARDYGVIFIE TSAKAGFNIK PLFRKIAAAL PGMETLSSTK QEDMVDVNLK TSSNSAQGEQ
201: QRGGCAC
101: SKWIEDVRTE RGSDVIIVLV GNKTDLVDKR QVSIEEGDNK ARDYGVIFIE TSAKAGFNIK PLFRKIAAAL PGMETLSSTK QEDMVDVNLK TSSNSAQGEQ
201: QRGGCAC
Arabidopsis Description
RABH1ERABH1e [Source:UniProtKB/TrEMBL;Acc:A0A178UPG4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.