CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31293	Soybean	cytosol	84.54	98.31
KRH43179	Soybean	cytosol	96.62	96.62
KRH59334	Soybean	endoplasmic reticulum	96.62	96.62
PGSC0003DMT400056111	Potato	cytosol	92.75	92.75
Solyc03g078570.2.1	Tomato	cytosol	92.27	92.27
VIT_00s0665g00040.t01	Wine grape	extracellular	78.26	91.01
AT2G22290.1	Thale cress	cytosol	90.34	90.34
GSMUA_Achr6P10400_001	Banana	cytosol	88.89	88.89
Bra038535.1-P	Field mustard	cytosol	88.41	88.41
CDY13772	Canola	cytosol	88.41	88.41
GSMUA_Achr2P22200_001	Banana	cytosol	87.92	87.92
KRH28235	Soybean	cytosol	87.92	87.92
KRH77258	Soybean	endoplasmic reticulum	87.92	87.92
KRH57563	Soybean	cytosol	85.51	85.92
KRH04283	Soybean	cytosol	85.51	85.92
Zm00001d006905_P001	Maize	mitochondrion	86.47	85.65
EER97564	Sorghum	cytosol	86.47	85.65
Os03t0191400-01	Rice	plasma membrane	81.16	78.14
KXG39985	Sorghum	cytosol	78.74	76.53
TraesCS4D01G305100.1	Wheat	cytosol	78.26	75.7
TraesCS4A01G407500.1	Wheat	cytosol	77.78	75.23
TraesCS4B01G306900.1	Wheat	cytosol	77.29	74.77
KRH77257	Soybean	endoplasmic reticulum	61.35	72.16
Zm00001d028012_P001	Maize	cytosol, extracellular	67.15	62.61
CDX76936	Canola	cytosol	81.64	61.45
HORVU4Hr1G078690.2	Barley	plastid	77.29	52.12
KRH23467	Soybean	cytosol	21.74	40.18
KRH09851	Soybean	cytosol, mitochondrion, plastid	38.16	39.5
KRG91957	Soybean	cytosol	38.16	39.5
KRH60288	Soybean	mitochondrion	37.2	38.69
KRH34819	Soybean	cytosol	37.68	38.05
KRG98019	Soybean	cytosol	36.23	37.5
KRH41580	Soybean	cytosol	34.78	37.11
KRH20053	Soybean	endoplasmic reticulum	36.23	32.19
KRH28236	Soybean	cytosol	56.52	24.68

Protein Annotations

EntrezGene:100799871	MapMan:22.8.1.8	Gene3D:3.40.50.300	EMBL:ACUP02010800	EnsemblPlantsGene:GLYMA_18G017000	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0006810
GO:GO:0006890	GO:GO:0006891	GO:GO:0008150	GO:GO:0016787	GO:GO:0042147	UniProt:I1MYR8
EnsemblPlants:KRG97576	ProteinID:KRG97576	ProteinID:KRG97576.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF630	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000233EB29
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:1213993..1219616

Molecular Weight (calculated)

23126.7 Da

IEP (calculated)

6.729

GRAVY (calculated)

-0.219

Length

207 amino acids

Sequence
(BLAST)

001: MATVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDINYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVVVYD VANRQSFLNT
101: NKWIEEVRTE RGSDVIIVLV GNKTDLVEKR QVSIEEGDAK SRESGIMFIE TSAKAGFNIK PLFRKIAAAL PGMETLSSTK QEDMVDVNLK PTVNSSQAEQ
201: QGGGCSC

Best Arabidopsis Sequence Match ( AT5G10260.1 )
(BLAST)

001: MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VANRQSFLNT
101: SKWIEDVRTE RGSDVIIVLV GNKTDLVDKR QVSIEEGDNK ARDYGVIFIE TSAKAGFNIK PLFRKIAAAL PGMETLSSTK QEDMVDVNLK TSSNSAQGEQ
201: QRGGCAC

Arabidopsis Description

RABH1ERABH1e [Source:UniProtKB/TrEMBL;Acc:A0A178UPG4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.