Factsheet for HORVU2Hr1G027490.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G013720.3	Barley	cytosol, mitochondrion, nucleus	83.51	77.34
HORVU7Hr1G101140.7	Barley	mitochondrion	76.06	65.9
Os06t0687100-01	Rice	cytosol	65.96	62.0
VIT_11s0016g04020.t01	Wine grape	cytosol	56.91	61.85
KXG20675	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.43	61.5
KRH23467	Soybean	cytosol	32.45	54.46
KRH60288	Soybean	mitochondrion	56.91	53.77
KRH41580	Soybean	cytosol	54.79	53.09
VIT_09s0002g04600.t01	Wine grape	cytosol	55.32	52.26
GSMUA_Achr6P02970_001	Banana	cytosol	55.32	52.0
KRH09851	Soybean	cytosol, mitochondrion, plastid	52.66	49.5
HORVU5Hr1G002970.1	Barley	plastid	54.79	49.28
GSMUA_Achr5P23540_001	Banana	endoplasmic reticulum	60.64	49.14
HORVU4Hr1G002980.2	Barley	cytosol	54.26	42.68
HORVU4Hr1G072020.1	Barley	cytosol	44.68	32.31
HORVU2Hr1G050270.2	Barley	cytosol	34.04	30.77
HORVU4Hr1G078690.2	Barley	plastid	34.57	21.17

Protein Annotations

MapMan:22.8.1.6	Gene3D:3.40.50.300	UniProt:A0A287HHG9	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:HORVU2Hr1G027490	EnsemblPlants:HORVU2Hr1G027490.2
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF683
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000B4662E2	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:90786014..90786967

Molecular Weight (calculated)

21083.5 Da

IEP (calculated)

9.498

GRAVY (calculated)

-0.132

Length

188 amino acids

Sequence
(BLAST)

001: LRAWVRVQVL LGDLGTGKTS IVVRFAKGLY YECEESTIGV AFFLHALPVS GVGEDATVRF DIWDTVGQER YHSLAPMCYR GAAAAVVVYD ITSTDSYTRA
101: KRWVDELQRQ GNPHLVMALV GNKVDLKKKR KVDLKKKRKY AERNDLFFME TSAKTVQNVG ELFYYLGKDM QTLPASSRSA SSLACVCL

Best Arabidopsis Sequence Match ( AT3G54840.1 )
(BLAST)

001: MGCASSLPDR NSGTLSGLSN SENAVPADAK NLRVKLVLLG DSGVGKSCIV LRFVRGQFDA TSKVTVGASF LSQTIALQDS TTVKFEIWDT AGQERYSALA
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS

Arabidopsis Description

RABF1Ras-related protein RABF1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CB01]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.