Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81264 | Canola | cytosol | 91.24 | 97.06 |
| Bra037802.1-P | Field mustard | cytosol | 87.56 | 96.45 |
| AT5G64990.2 | Thale cress | cytosol | 77.88 | 79.34 |
| CDX69850 | Canola | cytosol | 70.97 | 74.76 |
| CDX96987 | Canola | cytosol | 70.97 | 74.76 |
| GSMUA_Achr5P12680_001 | Banana | plasma membrane | 70.51 | 73.56 |
| CDX78373 | Canola | cytosol | 70.05 | 73.43 |
| CDX81166 | Canola | cytosol | 70.05 | 73.43 |
| GSMUA_Achr1P00610_001 | Banana | cytosol | 60.37 | 73.18 |
| VIT_02s0012g00710.t01 | Wine grape | cytosol | 60.37 | 73.18 |
| TraesCS2B01G261200.1 | Wheat | cytosol | 70.05 | 73.08 |
| TraesCS2A01G236600.1 | Wheat | cytosol | 70.05 | 73.08 |
| Solyc01g088560.2.1 | Tomato | plastid | 70.05 | 73.08 |
| PGSC0003DMT400004322 | Potato | cytosol | 70.05 | 73.08 |
| Os07t0496000-01 | Rice | plasma membrane | 70.05 | 73.08 |
| HORVU2Hr1G050270.2 | Barley | cytosol | 70.05 | 73.08 |
| TraesCS2D01G234600.1 | Wheat | plastid | 70.05 | 73.08 |
| EER97251 | Sorghum | cytosol | 69.59 | 72.6 |
| Zm00001d006433_P001 | Maize | plasma membrane | 69.59 | 72.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.12 | 72.12 |
| KRH77258 | Soybean | endoplasmic reticulum | 68.66 | 71.98 |
| CDY13772 | Canola | cytosol | 68.66 | 71.98 |
| CDY30479 | Canola | cytosol | 68.66 | 71.63 |
| CDY48241 | Canola | cytosol | 68.66 | 71.63 |
| CDX95606 | Canola | cytosol | 68.66 | 71.63 |
| CDX74672 | Canola | cytosol | 68.66 | 71.63 |
| CDX83425 | Canola | cytosol | 68.66 | 71.63 |
| KRH28235 | Soybean | cytosol | 68.2 | 71.5 |
| CDY63926 | Canola | cytosol | 64.52 | 65.42 |
| Zm00001d021551_P002 | Maize | cytosol | 69.12 | 59.06 |
| CDY31610 | Canola | mitochondrion | 64.06 | 53.88 |
| CDX76936 | Canola | cytosol | 63.13 | 49.82 |
| CDX99356 | Canola | cytosol | 36.41 | 39.3 |
| CDY39412 | Canola | cytosol | 35.48 | 38.5 |
| CDY13065 | Canola | cytosol | 35.48 | 38.5 |
| CDX82579 | Canola | cytosol | 35.48 | 38.5 |
| CDX78949 | Canola | cytosol | 35.48 | 38.31 |
| CDY23153 | Canola | cytosol | 35.02 | 38.0 |
| CDY55834 | Canola | cytosol, plastid | 34.1 | 36.45 |
| CDX78272 | Canola | cytosol | 34.1 | 36.45 |
| CDY61658 | Canola | cytosol | 33.64 | 36.14 |
| CDX78945 | Canola | cytosol | 6.91 | 29.41 |
| CDY09323 | Canola | extracellular, plastid, vacuole | 14.75 | 28.07 |
| Zm00001d024612_P011 | Maize | mitochondrion | 33.18 | 25.0 |
| CDY23446 | Canola | cytosol | 68.66 | 24.79 |
| CDY02896 | Canola | endoplasmic reticulum, golgi | 28.11 | 22.68 |
Protein Annotations
| MapMan:22.8.1.8 | Gene3D:3.40.50.300 | GO:A0A078FZR9 | UniProt:A0A078FZR9 | EnsemblPlants:CDY18689 | ProteinID:CDY18689 |
| ProteinID:CDY18689.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00005766001 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF630 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | TMHMM:TMhelix | UniParc:UPI0004EE867F | SEG:seg | : |
Description
BnaA09g07060DBnaA09g07060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZR9]
Coordinates
chrLK032087:+:535619..536870
Molecular Weight (calculated)
24453.4 Da
IEP (calculated)
7.544
GRAVY (calculated)
-0.084
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHLGNYKLV FLGDQAVGKT SIITCFMYGN FDTNYQATIG IDFLSKTMRH EDTTFRLQLW YIHLLILFVV LVLDTAGQER FKSLIPSYIR DSSVAVIVYD
101: VANKQSFINA SKWIEDVHAE RGNQVIIALV GNKTDLVHRR QVSIEEGDTK ARELGALFIE TSAKAGFNIK PLFCKIASAL QGTETVTWRR QEDLVDVNLK
201: PMTNSSHSQQ QQGNCSC
101: VANKQSFINA SKWIEDVHAE RGNQVIIALV GNKTDLVHRR QVSIEEGDTK ARELGALFIE TSAKAGFNIK PLFCKIASAL QGTETVTWRR QEDLVDVNLK
201: PMTNSSHSQQ QQGNCSC
001: MGDLGKGYKL VFLGDQGVGK TSIITCFMYG KFDTSYQATI GIDFLSKTTR YEDRTFRLQL WYKKLSLGDT AGQERFKSLV PSYIRDSSVA VIVYDVASKQ
101: SFINTSKWIE EVRAERGSYV IIVLVGNKTD LVNKRQVSIE EGENKAREFG ALFMETSAKA GFNIKPLFCK ITSALQGNEA VSWTKQEDLV DVNLKPLMFS
201: SQANHQQESN CSC
101: SFINTSKWIE EVRAERGSYV IIVLVGNKTD LVNKRQVSIE EGENKAREFG ALFMETSAKA GFNIKPLFCK ITSALQGNEA VSWTKQEDLV DVNLKPLMFS
201: SQANHQQESN CSC
Arabidopsis Description
AtRABH1aRAB GTPase homolog H1A [Source:UniProtKB/TrEMBL;Acc:F4KGG4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.