Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39412 | Canola | cytosol | 99.5 | 99.5 |
| CDY13065 | Canola | cytosol | 95.5 | 95.5 |
| CDY23153 | Canola | cytosol | 95.0 | 95.0 |
| CDX99356 | Canola | cytosol | 90.5 | 90.05 |
| CDX78949 | Canola | cytosol | 90.0 | 89.55 |
| AT5G45130.2 | Thale cress | endoplasmic reticulum | 91.5 | 87.98 |
| Solyc02g069370.2.1 | Tomato | plastid | 86.0 | 86.0 |
| KRG98019 | Soybean | cytosol | 82.5 | 82.5 |
| Os03t0666500-01 | Rice | plasma membrane | 80.0 | 78.82 |
| EER93694 | Sorghum | cytosol | 80.0 | 78.82 |
| KXG24102 | Sorghum | cytosol | 80.0 | 78.43 |
| Zm00001d031179_P001 | Maize | extracellular, mitochondrion | 80.0 | 78.43 |
| Zm00001d013583_P001 | Maize | cytosol | 79.5 | 78.33 |
| PGSC0003DMT400050774 | Potato | cytosol | 78.0 | 78.0 |
| TraesCS4B01G019100.2 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 79.5 | 77.56 |
| TraesCS4A01G294600.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 79.5 | 77.56 |
| Os12t0631100-01 | Rice | plasma membrane | 78.5 | 77.34 |
| GSMUA_Achr7P16440_001 | Banana | cytosol | 78.0 | 77.23 |
| PGSC0003DMT400055259 | Potato | cytosol, plastid | 77.0 | 77.0 |
| CDX78945 | Canola | cytosol | 19.5 | 76.47 |
| HORVU5Hr1G002970.1 | Barley | plastid | 79.5 | 76.08 |
| TraesCS5B01G014400.1 | Wheat | plastid | 79.0 | 75.6 |
| GSMUA_Achr9P10010_001 | Banana | cytosol | 77.0 | 75.12 |
| TraesCS5D01G022200.2 | Wheat | golgi | 78.5 | 75.12 |
| TraesCS4D01G017300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 79.5 | 73.95 |
| KRH20053 | Soybean | endoplasmic reticulum | 82.5 | 70.82 |
| HORVU4Hr1G002980.2 | Barley | cytosol | 79.5 | 66.53 |
| GSMUA_Achr6P31600_001 | Banana | cytosol | 67.5 | 66.18 |
| VIT_04s0079g00760.t01 | Wine grape | cytosol | 72.5 | 63.32 |
| Zm00001d034949_P001 | Maize | extracellular, mitochondrion | 78.5 | 63.31 |
| CDY09323 | Canola | extracellular, plastid, vacuole | 35.0 | 61.4 |
| CDY61658 | Canola | cytosol | 50.5 | 50.0 |
| CDY55834 | Canola | cytosol, plastid | 50.0 | 49.26 |
| CDX78272 | Canola | cytosol | 50.0 | 49.26 |
| CDX74672 | Canola | cytosol | 42.0 | 40.38 |
| CDY48241 | Canola | cytosol | 41.5 | 39.9 |
| CDX83425 | Canola | cytosol | 41.5 | 39.9 |
| CDX95606 | Canola | cytosol | 41.5 | 39.9 |
| CDY30479 | Canola | cytosol | 41.5 | 39.9 |
| CDX81166 | Canola | cytosol | 39.5 | 38.16 |
| CDX78373 | Canola | cytosol | 39.5 | 38.16 |
| CDX96987 | Canola | cytosol | 38.5 | 37.38 |
| CDX69850 | Canola | cytosol | 38.5 | 37.38 |
| CDX81264 | Canola | cytosol | 38.0 | 37.25 |
| CDY13772 | Canola | cytosol | 38.0 | 36.72 |
| CDY63926 | Canola | cytosol | 38.5 | 35.98 |
| CDY18689 | Canola | cytosol | 38.5 | 35.48 |
| CDY02896 | Canola | endoplasmic reticulum, golgi | 41.5 | 30.86 |
| CDY31610 | Canola | mitochondrion | 38.5 | 29.84 |
| CDX76936 | Canola | cytosol | 37.0 | 26.91 |
| CDY23446 | Canola | cytosol | 41.5 | 13.81 |
Protein Annotations
| MapMan:22.8.1.6 | Gene3D:3.40.50.300 | GO:A0A078D2X8 | EnsemblPlants:CDX82579 | ProteinID:CDX82579 | ProteinID:CDX82579.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00137756001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF622 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EBEC86 | : |
Description
BnaC07g02870D
Coordinates
chrLK031829:+:69141..70981
Molecular Weight (calculated)
21598.7 Da
IEP (calculated)
5.315
GRAVY (calculated)
-0.045
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAGNKNIN AKLVLLGDVG AGKSSLVLRF VKDQFVEFQE STIGAAFFSQ TLAVNDATVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVF DITNQGSFER
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAET YALENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPTENP AGMVLPSGPA ATAVSSSCCA
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAET YALENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPTENP AGMVLPSGPA ATAVSSSCCA
001: MASSGNKNIN AKLVLLGDVG AGKSSLVLRF VKDQFVEFQE STIGAAFFSQ TLAVNDATVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVF DITNQASFER
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAEI YAQENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPAENP TGMVLPNGPG ATAVSSSCCA
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAEI YAQENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPAENP TGMVLPNGPG ATAVSSSCCA
Arabidopsis Description
ATRAB5ARAB homolog 1 [Source:TAIR;Acc:AT5G45130]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.