Factsheet for GSMUA_Achr6P32620_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	77.6	71.98
Os05t0341600-01	Rice	cytosol, plastid	70.31	63.68
GSMUA_Achr1P03160_001	Banana	cytosol	31.77	34.66
GSMUA_AchrUn_...	Banana	cytosol	25.52	34.03
GSMUA_Achr9P10010_001	Banana	cytosol	35.42	33.17
GSMUA_Achr6P31600_001	Banana	cytosol	34.9	32.84
GSMUA_Achr6P02970_001	Banana	cytosol	33.85	32.5
GSMUA_Achr7P16440_001	Banana	cytosol	33.85	32.18
GSMUA_Achr5P10670_001	Banana	cytosol	31.77	31.61
GSMUA_AchrUn_...	Banana	cytosol	14.58	30.11
GSMUA_Achr2P22200_001	Banana	cytosol	32.29	29.95
GSMUA_AchrUn_...	Banana	cytosol	32.29	29.81
GSMUA_Achr4P29310_001	Banana	plastid	33.85	29.68
GSMUA_Achr4P29680_001	Banana	cytosol	35.94	29.49
GSMUA_Achr5P12680_001	Banana	plasma membrane	31.77	29.33
GSMUA_Achr5P23540_001	Banana	endoplasmic reticulum	35.42	29.31
GSMUA_Achr1P02060_001	Banana	cytosol	35.42	28.45
GSMUA_Achr2P10990_001	Banana	cytosol	35.42	28.22
GSMUA_Achr6P10400_001	Banana	cytosol	29.69	27.54
GSMUA_Achr1P00610_001	Banana	cytosol	25.0	26.82

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G32620_001	EnsemblPlants:GSMUA_Achr6P32620_001	EnsemblPlants:GSMUA_Achr6T32620_001
UniProt:M0TC56	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF509	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTPase
UniParc:UPI0002969D1A	SEG:seg	:	:	:	:

Description

Putative Ras-related protein Rab-21 [Source:GMGC_GENE;Acc:GSMUA_Achr6G32620_001]

Coordinates

chr6:+:31954756..31958728

Molecular Weight (calculated)

21380.1 Da

IEP (calculated)

9.817

GRAVY (calculated)

-0.151

Length

192 amino acids

Sequence
(BLAST)

001: MSSRARNLTF KLVLLGDGRV GKTSLLTKRL VIGGVPITLS IWDTAGQERF HALGPIYYRD ADGMHLINTM LLVYDVTDTD TFLRVRKWVK ELQQMASNDI
101: VMVIAANKND FIRSKKYDIQ EAESYAMTIG AKLFLTSAKF GSGINDVFLD LTARLLQKKK NSAQGSSPAL PRKGIIVVDD EPEREPPPKC CS

Best Arabidopsis Sequence Match ( AT5G45130.1 )
(BLAST)

001: MASSGNKNIN AKLVLLGDVG AGKSSLVLRF VKDQFVEFQE STIGAAFFSQ TLAVNDATVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVF DITNQASFER
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAEI YAQENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPAENP TGMVLPNGPG ATAVSSSCCA

Arabidopsis Description

ATRAB5ARAB homolog 1 [Source:TAIR;Acc:AT5G45130]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.