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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • plasma membrane 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400055259 Potato cytosol, plastid 96.0 96.0
KRG98019 Soybean cytosol 90.0 90.0
Solyc02g081380.2.1 Tomato plastid 87.5 87.5
Solyc02g069370.2.1 Tomato plastid 81.0 81.0
GSMUA_AchrUn_... Banana cytosol 58.0 80.56
KRH20053 Soybean endoplasmic reticulum 90.0 77.25
GSMUA_Achr4P29680_001 Banana cytosol 79.5 67.95
VIT_04s0079g00760.t01 Wine grape cytosol 77.0 67.25
GSMUA_Achr2P10990_001 Banana cytosol 81.0 67.22
GSMUA_Achr1P02060_001 Banana cytosol 78.5 65.69
Solyc11g008430.1.1 Tomato cytosol 54.5 54.5
Solyc01g088560.2.1 Tomato plastid 38.5 37.02
Solyc05g051570.2.1 Tomato nucleus 37.0 35.75
Solyc03g078570.2.1 Tomato cytosol 36.0 34.78
Protein Annotations
MapMan:22.8.1.6Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924
GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005768GO:GO:0016787GO:GO:0030139UniProt:K4B5T8InterPro:P-loop_NTPasePFAM:PF00071
PRINTS:PR00449PFscan:PS51419PANTHER:PTHR24073PANTHER:PTHR24073:SF622SMART:SM00173SMART:SM00174
SMART:SM00175SMART:SM00176SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseEnsemblPlantsGene:Solyc02g036450.2
EnsemblPlants:Solyc02g036450.2.1TIGRFAMs:TIGR00231UniParc:UPI000276773FSEG:seg::
Description
No Description!
Coordinates
chr2:-:30788590..30794213
Molecular Weight (calculated)
21958.1 Da
IEP (calculated)
8.201
GRAVY (calculated)
-0.181
Length
200 amino acids
Sequence
(BLAST)
001: MAATAHNNLN AKLVLLGDMG AGKSSLVIRF VKGQFLEFQE STIGAAFFSS TVSVNNSTVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVY DITSTDSFAR
101: AKKWVQELQK QGNPIMVMAL AGNKADLEDK RKVTAEEAHL YAEENGLFFM ETSAKTAVNV NDIFYEIAKR LPRAQPAQNQ AGMVLVDRRA EGSRTSSCCS
Best Arabidopsis Sequence Match ( AT5G45130.1 )
(BLAST)
001: MASSGNKNIN AKLVLLGDVG AGKSSLVLRF VKDQFVEFQE STIGAAFFSQ TLAVNDATVK FEIWDTAGQE RYHSLAPMYY RGAAAAIIVF DITNQASFER
101: AKKWVQELQA QGNPNMVMAL AGNKADLLDA RKVSAEEAEI YAQENSLFFM ETSAKTATNV KDIFYEIAKR LPRVQPAENP TGMVLPNGPG ATAVSSSCCA
Arabidopsis Description
ATRAB5ARAB homolog 1 [Source:TAIR;Acc:AT5G45130]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.