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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68299
CDX72702
CDX72833
CDX73996
CDX78272
CDX90332
CDX96350
CDY02896
CDY07941
CDY12143
CDY22207
CDY36679
CDY41316
CDY41581
CDY41977
CDY53185
CDY54618
CDY55834
CDY61658
CDY66903
CDY66904

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G71830.1 CDX68299 AT1G71830.1 11397085
AT1G71830.1 CDX72833 AT1G71830.1 11397085
AT1G71830.1 CDX96350 AT1G71830.1 11397085
AT1G71830.1 CDY36679 AT1G71830.1 11397085
AT1G71830.1 CDX68299 AT1G71830.1 16621602
AT1G71830.1 CDX72833 AT1G71830.1 16621602
AT1G71830.1 CDX96350 AT1G71830.1 16621602
AT1G71830.1 CDY36679 AT1G71830.1 16621602
AT1G71830.1 CDX73996 AT3G09840.1 15592873
AT1G71830.1 CDY07941 AT3G09840.1 15592873
AT1G71830.1 CDY22207 AT3G09840.1 15592873
AT1G71830.1 CDY41316 AT3G09840.1 15592873
AT1G71830.1 CDY41581 AT3G09840.1 15592873
AT1G71830.1 CDY54618 AT3G09840.1 15592873
AT1G71830.1 CDX73996 AT3G09840.1 16473966
AT1G71830.1 CDY07941 AT3G09840.1 16473966
AT1G71830.1 CDY22207 AT3G09840.1 16473966
AT1G71830.1 CDY41316 AT3G09840.1 16473966
AT1G71830.1 CDY41581 AT3G09840.1 16473966
AT1G71830.1 CDY54618 AT3G09840.1 16473966
AT1G71830.1 CDX73996 AT3G09840.1 16621602
AT1G71830.1 CDY07941 AT3G09840.1 16621602
AT1G71830.1 CDY22207 AT3G09840.1 16621602
AT1G71830.1 CDY41316 AT3G09840.1 16621602
AT1G71830.1 CDY41581 AT3G09840.1 16621602
AT1G71830.1 CDY54618 AT3G09840.1 16621602
AT1G71830.1 CDX73996 AT3G09840.1 17693538
AT1G71830.1 CDY07941 AT3G09840.1 17693538
AT1G71830.1 CDY22207 AT3G09840.1 17693538
AT1G71830.1 CDY41316 AT3G09840.1 17693538
AT1G71830.1 CDY41581 AT3G09840.1 17693538
AT1G71830.1 CDY54618 AT3G09840.1 17693538
AT1G71830.1 CDX78272 AT3G54840.1 16621602
AT1G71830.1 CDY02896 AT3G54840.1 16621602
AT1G71830.1 CDY55834 AT3G54840.1 16621602
AT1G71830.1 CDY61658 AT3G54840.1 16621602
AT1G71830.1 CDX72702 AT4G39400.1 16473966
AT1G71830.1 CDX90332 AT4G39400.1 16473966
AT1G71830.1 CDY12143 AT4G39400.1 16473966
AT1G71830.1 CDY41977 AT4G39400.1 16473966
AT1G71830.1 CDY53185 AT4G39400.1 16473966
AT1G71830.1 CDY66903 AT4G39400.1 16473966
AT1G71830.1 CDY66904 AT4G39400.1 16473966
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36679 Canola plasma membrane 80.82 92.27
Bra003911.1-P Field mustard plasma membrane 73.77 91.59
CDX96350 Canola plasma membrane 79.83 90.56
CDX72833 Canola plasma membrane 79.69 90.4
AT1G71830.1 Thale cress plasma membrane 79.55 90.24
KRG91762 Soybean plasma membrane 74.75 84.94
VIT_18s0164g00070.t01 Wine grape plasma membrane 74.61 84.78
KRH35013 Soybean plasma membrane 74.61 84.78
Solyc04g072570.2.1 Tomato extracellular 74.05 83.47
KRH70218 Soybean endoplasmic reticulum 73.2 83.17
TraesCS6D01G186900.2 Wheat plasma membrane 70.38 82.62
TraesCS6A01G203600.2 Wheat cytosol 70.24 81.77
GSMUA_Achr7P17210_001 Banana cytosol 56.56 81.34
TraesCS7D01G291200.3 Wheat plasma membrane 71.23 81.32
Os08t0174700-01 Rice plasma membrane 71.37 81.09
TraesCS7A01G293300.3 Wheat plasma membrane 70.8 80.71
TraesCS7B01G182300.1 Wheat plasma membrane 70.52 80.39
GSMUA_AchrUn_... Banana plasma membrane 71.23 80.16
GSMUA_Achr2P14850_001 Banana plastid 70.52 80.0
PGSC0003DMT400070819 Potato plasma membrane 71.23 79.65
Os04t0457800-01 Rice plasma membrane 70.38 79.46
HORVU6Hr1G049080.7 Barley plasma membrane 70.38 79.46
TraesCS6B01G223700.3 Wheat plasma membrane 70.38 79.46
KXG24562 Sorghum plasma membrane 70.52 79.24
EES07030 Sorghum plasma membrane 69.82 79.07
Zm00001d016928_P010 Maize plasma membrane 69.82 79.07
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 69.53 78.63
TraesCS2B01G340700.1 Wheat plasma membrane 69.53 78.63
Zm00001d024430_P002 Maize plasma membrane 70.66 78.53
TraesCS2D01G321400.1 Wheat mitochondrion 69.39 78.47
GSMUA_Achr10P... Banana plasma membrane 69.25 78.43
Zm00001d050868_P004 Maize plasma membrane 68.69 78.17
EES12285 Sorghum plasma membrane 68.12 77.65
Zm00001d025580_P001 Maize plasma membrane 67.98 77.49
GSMUA_Achr7P11620_001 Banana plasma membrane 69.96 77.14
CDX75351 Canola plasma membrane 66.15 76.14
CDX72403 Canola plasma membrane 64.6 75.95
CDX68975 Canola plasma membrane 65.87 75.94
CDY46116 Canola plasma membrane 64.46 75.79
CDY45042 Canola plasma membrane 65.3 75.65
HORVU7Hr1G068990.2 Barley mitochondrion 71.09 74.78
Zm00001d049480_P005 Maize plasma membrane 66.85 71.93
HORVU2Hr1G080020.6 Barley cytosol 69.53 69.63
GSMUA_Achr10P... Banana mitochondrion 70.94 69.38
CDX89615 Canola plasma membrane 59.66 69.34
CDX93126 Canola plasma membrane 59.52 69.18
CDY28301 Canola plasma membrane 38.65 69.02
CDY48450 Canola plasma membrane 59.24 68.63
CDX71165 Canola plasma membrane 57.26 65.7
CDY39690 Canola cytosol 55.15 64.42
CDY28194 Canola cytosol 25.53 58.77
Os06t0225300-01 Rice plasma membrane 49.93 57.47
CDY61508 Canola cytosol 37.8 52.86
CDY40089 Canola plasma membrane 45.42 52.7
CDY44608 Canola cytosol 37.66 52.66
CDX85768 Canola plasma membrane 45.27 52.54
CDY55159 Canola extracellular, plasma membrane, vacuole 44.43 51.81
CDY08807 Canola plasma membrane 44.43 51.81
CDX69484 Canola plasma membrane 45.7 51.1
CDY26481 Canola plasma membrane 45.42 50.55
CDY48073 Canola plasma membrane 45.27 50.16
CDX83534 Canola plasma membrane 45.13 50.0
CDY61461 Canola golgi, plasma membrane 44.57 49.76
CDY46185 Canola golgi, plasma membrane 44.57 49.69
CDY41531 Canola cytosol 40.06 49.05
CDX84436 Canola cytosol 39.77 48.7
CDX72249 Canola plasma membrane 42.88 47.72
CDY39685 Canola plasma membrane 42.31 47.1
CDY65182 Canola plasma membrane 42.03 46.78
CDY39211 Canola plasma membrane 37.8 46.29
CDY39449 Canola plasma membrane 39.63 45.69
CDX77614 Canola plasma membrane 39.35 45.44
CDX68670 Canola plasma membrane 37.66 44.5
CDX70667 Canola endoplasmic reticulum, golgi 45.13 44.44
CDX78667 Canola golgi, plasma membrane 44.99 44.12
CDY52435 Canola plasma membrane, vacuole 17.77 35.9
CDX88452 Canola plasma membrane, vacuole 17.63 35.61
CDY00320 Canola endoplasmic reticulum 0.85 35.29
CDX84346 Canola plasma membrane 29.05 35.27
CDY00321 Canola plasma membrane 28.91 35.1
CDX84187 Canola plasma membrane 27.93 33.62
CDY16762 Canola plasma membrane 28.21 33.22
CDY31708 Canola plasma membrane 27.5 33.22
CDX87267 Canola plasma membrane 28.07 33.11
CDY32113 Canola plasma membrane 27.22 32.82
CDY40456 Canola plasma membrane 27.5 32.66
CDX79610 Canola plasma membrane 27.22 32.49
CDX84610 Canola plasma membrane 27.22 32.49
CDY67608 Canola cytosol, mitochondrion, nucleus 2.82 25.0
CDX68667 Canola cytosol, mitochondrion, nucleus 2.82 25.0
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078BWY8EnsemblPlants:CDX68299ProteinID:CDX68299
ProteinID:CDX68299.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005102
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00099588001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069PFAM:PF00560PFAM:PF07714
PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF494
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDEEFCSEG:seg
Description
BnaA07g23390D
Coordinates
chrLK031787:-:4886811..4890446
Molecular Weight (calculated)
78971.6 Da
IEP (calculated)
6.860
GRAVY (calculated)
-0.114
Length
709 amino acids
Sequence
(BLAST)
001: MWLLSCFLSS YYQIMPLLIL KVCCDALHTL RVTLVDPNNV LQSWDPTLVN PCTWFHVTCN NENSVIRVDL GNAELSGHLV PELGVLKNLQ YLELYSNNIT
101: GPIPSNLGNL TNLVSLDLYL NSFTGPIPES LGKLSKLRFL RLNNNTLTGS IPMSLTNITT LQVLDLSNNQ LSGSVPDNGS FSLFTPISFA NNLDLCGPVT
201: SHPCPGSPPK QKMRSLPLLL TIFDFTGGYG ITGAIAGGVA AGAALLFAAP AIAFAWWRRR KPHDIFFDVP EVHLGQLKRF SLRELQVASD GFSNKNILGR
301: GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRKPH DIFFDVPGEF NRELIVHLGQ LKRFSLRELQ VASDGFSNKN ILGRGGFGKV
401: YKGRLADGTL VAVKRLKEER TPGGELQFQT EVEMISMAVH RNLLRLRGFC MTPTERLLVY PYMANGSVAS CLRERPPSQP PLDWPTRKRI ALGSARGLSY
501: LHDHCDPKII HRDVKAANIL LDKDFEAVVG DFGLAKLMDY KDTHVTTAVR GTIGHIAPEY LSTGKSSEKT DVFGYGIMLL ELITGQRAFD LARLANDDDV
601: MLLDWVKGLL KEKKLEMLVD PDLQTNYEER ELEQVIQVAL LCTQGSPMER PKMSEVVRML EGDGLAERWD EWQKVEILRE DVDLSTNLHS DWIVDSTYNL
701: HAVELSGPR
Best Arabidopsis Sequence Match ( AT1G34210.1 )
(BLAST)
001: MGRKKFEAFG FVCLISLLLL FNSLWLASSN MEGDALHSLR ANLVDPNNVL QSWDPTLVNP CTWFHVTCNN ENSVIRVDLG NADLSGQLVP QLGQLKNLQY
101: LELYSNNITG PVPSDLGNLT NLVSLDLYLN SFTGPIPDSL GKLFKLRFLR LNNNSLTGPI PMSLTNIMTL QVLDLSNNRL SGSVPDNGSF SLFTPISFAN
201: NLDLCGPVTS RPCPGSPPFS PPPPFIPPPI VPTPGGYSAT GAIAGGVAAG AALLFAAPAL AFAWWRRRKP QEFFFDVPAE EDPEVHLGQL KRFSLRELQV
301: ATDSFSNKNI LGRGGFGKVY KGRLADGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPPSQLP
401: LAWSIRQQIA LGSARGLSYL HDHCDPKIIH RDVKAANILL DEEFEAVVGD FGLARLMDYK DTHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGIMLLE
501: LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKLEMLVDP DLQSNYTEAE VEQLIQVALL CTQSSPMERP KMSEVVRMLE GDGLAEKWDE WQKVEVLRQE
601: VELSSHPTSD WILDSTDNLH AMELSGPR
Arabidopsis Description
SERK2Somatic embryogenesis receptor kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIC7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.