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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 10
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0718300-01
Os01t0891300-01
Os01t0891601-01
Os01t0891700-01
Os01t0892300-01
Os03t0151800-02
Os03t0151900-01
Os04t0457800-01
Os05t0414700-01
Os06t0225300-01
Os08t0174700-01
Os09t0509700-01
Os10t0441800-01
Os10t0442600-01
Os11t0249900-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34210.1 Os01t0891300-01 AT5G48380.1 19616764
AT1G34210.1 Os01t0891601-01 AT5G48380.1 19616764
AT1G34210.1 Os01t0891700-01 AT5G48380.1 19616764
AT1G34210.1 Os01t0892300-01 AT5G48380.1 19616764
AT1G34210.1 Os05t0414700-01 AT5G48380.1 19616764
AT1G34210.1 Os11t0249900-01 AT5G48380.1 19616764
AT1G71830.1 Os04t0457800-01 AT1G71830.1 11397085
AT1G71830.1 Os06t0225300-01 AT1G71830.1 11397085
AT1G71830.1 Os08t0174700-01 AT1G71830.1 11397085
AT1G71830.1 Os04t0457800-01 AT1G71830.1 16621602
AT1G71830.1 Os06t0225300-01 AT1G71830.1 16621602
AT1G71830.1 Os08t0174700-01 AT1G71830.1 16621602
AT1G71830.1 Os09t0509700-01 AT2G33500.1 16473966
AT1G71830.1 Os03t0151800-02 AT3G09840.1 15592873
AT1G71830.1 Os10t0442600-01 AT3G09840.1 15592873
AT1G71830.1 Os03t0151800-02 AT3G09840.1 16473966
AT1G71830.1 Os10t0442600-01 AT3G09840.1 16473966
AT1G71830.1 Os03t0151800-02 AT3G09840.1 16621602
AT1G71830.1 Os10t0442600-01 AT3G09840.1 16621602
AT1G71830.1 Os03t0151800-02 AT3G09840.1 17693538
AT1G71830.1 Os10t0442600-01 AT3G09840.1 17693538
AT1G71830.1 Os03t0151900-01 AT3G54840.1 16621602
AT1G71830.1 Os10t0441800-01 AT3G54840.1 16621602
AT1G71830.1 Os01t0718300-01 AT4G39400.1 16473966
AT2G13790.1 Os01t0718300-01 AT4G39400.1 17600708
AT2G13790.1 Os01t0891300-01 AT5G48380.1 19616764
AT2G13790.1 Os01t0891601-01 AT5G48380.1 19616764
AT2G13790.1 Os01t0891700-01 AT5G48380.1 19616764
AT2G13790.1 Os01t0892300-01 AT5G48380.1 19616764
AT2G13790.1 Os05t0414700-01 AT5G48380.1 19616764
AT2G13790.1 Os11t0249900-01 AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 51.46 61.2
KRH10503 Soybean cytosol, plastid 45.78 60.26
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 51.14 60.0
GSMUA_Achr7P17210_001 Banana cytosol 47.89 59.84
Os08t0174700-01 Rice plasma membrane 59.42 58.65
GSMUA_AchrUn_... Banana plasma membrane 59.9 58.57
VIT_18s0164g00070.t01 Wine grape plasma membrane 59.25 58.49
VIT_07s0031g01410.t01 Wine grape plasma membrane 59.25 58.49
KRG91762 Soybean plasma membrane 59.25 58.49
Solyc10g047140.1.1 Tomato plasma membrane 58.28 58.37
KRH70218 Soybean endoplasmic reticulum 58.93 58.17
KRH35013 Soybean plasma membrane 58.93 58.17
GSMUA_Achr2P14850_001 Banana plastid 58.77 57.92
CDY36679 Canola plasma membrane 58.28 57.81
Solyc01g104970.2.1 Tomato plasma membrane 57.79 57.79
Solyc04g072570.2.1 Tomato extracellular 58.93 57.71
AT1G34210.1 Thale cress plasma membrane 58.77 57.64
Bra037006.1-P Field mustard mitochondrion 44.81 57.62
AT1G71830.1 Thale cress plasma membrane 58.44 57.6
Os04t0457800-01 Rice plasma membrane 58.6 57.48
CDX72833 Canola plasma membrane 58.12 57.28
CDX96350 Canola plasma membrane 58.12 57.28
VIT_12s0055g01160.t01 Wine grape plasma membrane 56.66 57.21
GSMUA_Achr10P... Banana plasma membrane 58.12 57.19
VIT_12s0055g01280.t01 Wine grape plasma membrane 47.56 57.12
KRH43924 Soybean plasma membrane 56.98 56.98
GSMUA_Achr7P11620_001 Banana plasma membrane 59.25 56.77
Bra003911.1-P Field mustard plasma membrane 52.6 56.74
AT2G13790.1 Thale cress plasma membrane 56.49 56.13
CDY45042 Canola plasma membrane 55.68 56.05
CDX68975 Canola plasma membrane 55.68 55.77
CDY46116 Canola plasma membrane 54.55 55.72
CDX72403 Canola plasma membrane 54.55 55.72
CDX75351 Canola plasma membrane 55.68 55.68
Bra016112.1-P Field mustard plasma membrane 54.71 55.52
KRH58311 Soybean plasma membrane 55.19 54.75
Bra034562.1-P Field mustard plasma membrane 50.0 54.42
PGSC0003DMT400070819 Potato plasma membrane 56.01 54.42
VIT_12s0055g01150.t01 Wine grape plasma membrane 53.57 54.28
CDX89615 Canola plasma membrane 53.57 54.1
CDX93126 Canola plasma membrane 53.57 54.1
CDY48450 Canola plasma membrane 53.73 54.09
KRH42193 Soybean plasma membrane 53.9 53.9
Bra011439.1-P Field mustard plasma membrane 45.29 53.65
CDY28301 Canola plasma membrane 34.42 53.4
Bra032128.1-P Field mustard cytosol 42.05 53.18
Bra041056.1-P Field mustard plasma membrane 44.48 53.0
AT2G13800.3 Thale cress plasma membrane 51.3 52.58
AT4G33430.2 Thale cress plasma membrane 56.17 52.27
KRH58312 Soybean plasma membrane 52.11 52.2
CDX71165 Canola plasma membrane 52.27 52.1
Bra032125.1-P Field mustard plasma membrane 44.64 51.21
GSMUA_Achr10P... Banana mitochondrion 59.74 50.76
CDX68299 Canola plasma membrane 57.47 49.93
CDY39690 Canola cytosol 48.38 49.09
Bra013136.1-P Field mustard plasma membrane 41.72 44.46
Os01t0171000-01 Rice plasma membrane 45.13 44.27
Os02t0283800-01 Rice plasma membrane 43.18 43.82
Os06t0274500-01 Rice extracellular 44.32 42.66
Os11t0607200-01 Rice plasma membrane 41.23 41.78
Os08t0442700-01 Rice plasma membrane 44.97 40.86
VIT_12s0121g00310.t01 Wine grape cytosol, mitochondrion 19.32 40.07
Os02t0236100-01 Rice plasma membrane 40.1 39.84
Os03t0266800-01 Rice plasma membrane 31.49 32.66
Os01t0247500-01 Rice golgi, plasma membrane 18.02 31.71
Os02t0728500-01 Rice extracellular, plasma membrane 16.56 31.48
Os12t0638100-01 Rice plasma membrane 31.17 30.57
Protein Annotations
Gene3D:1.10.510.10MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:4340544
EMBL:AK100258ProteinID:BAD37288.1ProteinID:BAF19110.1ProteinID:BAS96861.1ProteinID:EEE65366.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004675GO:GO:0004871
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0007166GO:GO:0007178
GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009742GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0038023
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptEnsemblPlantsGene:Os06g0225300EnsemblPlants:Os06t0225300-01PFAM:PF00069PFAM:PF00560PFAM:PF08263
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51450PANTHER:PTHR27001PANTHER:PTHR27001:SF215
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q67X31SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000042622CRefSeq:XP_015643547.1SEG:seg
Description
somatic embryogenesis receptor-like kinase 3, somatic embryogenesis receptor kinase 3, SERK-like gene 6, bri1-associated receptor kinase 1 (BAK1) homologue 3, BRASSINOSTEROID INSENSITIVE1-ASSOCIATED RECEPTOR KINASE1Similar to SERK1 (Fragment). (Os06t0225300-01);Similar to SERK1 (Fragment). (Os06t0225300-02)
Coordinates
chr6:-:6484242..6488553
Molecular Weight (calculated)
67725.3 Da
IEP (calculated)
5.970
GRAVY (calculated)
-0.133
Length
616 amino acids
Sequence
(BLAST)
001: MAARRRLLLL LVLLLCRLAA VLPTSEVEAL QGFMAGFAGG NAAFQSWDAS APNPCTWFHV TCGPGNQVIR LDLGNQSLSG ELKPDIWQLQ ALQSLELYGN
101: SISGKIPSEL GRLASLQTLD LYLNNFTGEI PNELGNLSKL SNLRLNNNSL SGAIPMSLTT IQNLEVLDLS HNNLSGIIPT NGSFSHFTPI SFSNNPRTFA
201: NSSDSPSNNS GAAVPSGRSS ASSIGTIAGG AAAGAAMLFA APIVLFAWWW RRKPHDQFFD LLEEETPEVH LGQLRRFTLR ELQVATDNFS QTNLLGRGGF
301: GKVYKGRLLD GSLIAIKRLN EDRIGTGERQ FLMEVEIISM AVHQNLLRLQ GYCMTPTERL LVYPYMENKS LETRLRECSD SQQPLDWPTR RKIALGSARG
401: ISYLHEGCDP KIIHRDVKAA NILLDEKLEA VVGDFGLARI MDYKVSHVVT GVMGTLGHIP MEYLTAGRTS DKTDVFGYGI MLFELISGKR GFDLVGLANE
501: ENARVHDWVK KLLEEDRLEV LIDPNLLEIY NGGEQGVREE MRLLVQIALL CTQESAPSRP RMSTVVTMLE DGIAEHWDAW QRKTIVQASL QGGQGVSEAR
601: NDSVANLPPD TLSGPR
Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)
001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
Arabidopsis Description
SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.