Factsheet for Os02t0236100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G146100.1	Wheat	plasma membrane	87.42	86.58
TraesCS6B01G184300.1	Wheat	plasma membrane	87.26	86.42
TraesCS6A01G156100.1	Wheat	plasma membrane	87.1	86.26
Zm00001d037840_P001	Maize	cytosol	50.48	85.05
Zm00001d036887_P001	Maize	plasma membrane	37.26	84.31
EES06565	Sorghum	plasma membrane	84.68	83.73
Zm00001d016197_P001	Maize	vacuole	84.03	83.36
GSMUA_Achr6P00440_001	Banana	plasma membrane	66.61	68.83
Solyc02g072310.2.1	Tomato	plasma membrane	50.48	66.45
VIT_10s0003g01490.t01	Wine grape	plasma membrane	64.35	66.06
KRH11043	Soybean	plasma membrane	60.32	65.85
KRH21243	Soybean	plasma membrane	64.35	63.94
PGSC0003DMT400073093	Potato	plasma membrane	63.55	63.04
CDX77614	Canola	plasma membrane	62.1	62.7
Bra025056.1-P	Field mustard	plasma membrane	62.1	62.6
CDY39449	Canola	plasma membrane	61.94	62.44
AT5G45780.1	Thale cress	plasma membrane	61.61	62.22
Os01t0171000-01	Rice	plasma membrane	53.87	53.18
Os06t0274500-01	Rice	extracellular	51.61	50.0
Os04t0457800-01	Rice	plasma membrane	47.58	46.97
Os08t0174700-01	Rice	plasma membrane	46.94	46.63
Os08t0442700-01	Rice	plasma membrane	50.65	46.31
Os02t0283800-01	Rice	plasma membrane	42.58	43.49
Os11t0607200-01	Rice	plasma membrane	41.94	42.76
Os06t0225300-01	Rice	plasma membrane	39.84	40.1
Os02t0728500-01	Rice	extracellular, plasma membrane	20.0	38.27
Os03t0266800-01	Rice	plasma membrane	33.06	34.51
Os01t0247500-01	Rice	golgi, plasma membrane	18.71	33.14
Os12t0638100-01	Rice	plasma membrane	30.97	30.57

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:4328829	EMBL:AB625452
EMBL:AK120541	ProteinID:BAD27594.1	ProteinID:BAF08303.1	ProteinID:BAS77821.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	EnsemblPlantsGene:Os02g0236100	EnsemblPlants:Os02t0236100-01
PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF104	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q6EUS5	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00003CE461
RefSeq:XP_015626223.1	SEG:seg	:	:	:	:

Description

defective in outer cell layer specification 1, SERK-like gene 4, bri1-associated receptor kinase 1 (BAK1) homologue 9Leucine-rich repeat receptor-like kinase, Specification of root outer cell layers (Os02t0236100-01)

Coordinates

chr2:-:7711097..7715739

Molecular Weight (calculated)

67793.7 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.053

Length

620 amino acids

Sequence
(BLAST)

001: MAGPRALAVA AAVVVAAWAV AAAGDPPLSP KGLNYEVAAL MAVKSRMRDE KGVMGGWDIN SVDPCTWSMV ACSPDGFVVS LQMANNGLAG TLSPSIGNLS
101: HLQTMLLQNN MISGGIPPEI GKLTNLKALD LSGNQFVGEI PSSLGRLTEL NYLRLDKNNL SGQIPEDVAK LPGLTFLDLS SNNLSGPVPK IYAHDYSIAG
201: NRFLCNSSIM HGCKDLTVLT NESTISSPSK KTNSHHQLAL AISLSIICAT VFVLFVICWL KYCRWRLPFA SADQDLEIEL GHLKHFSFHE LQSATDNFNS
301: KNILGQGGFG VVYKGCLRNG ALVAVKRLKD PDITGEVQFQ TEVELIGLAV HRNLLRLYGF CMTSKERLLV YPYMPNGSVA DRLRDYHHGK PSLDWSKRMR
401: IAVGAARGLL YLHEQCNPKI IHRDVKAANI LLDESFEAIV GDFGLAKLLD RQESHVTTAV RGTIGHIAPE YLSTGQSSEK TDVYGFGILL LELITGPKTL
501: SNGHAQSQKG MILDWVREVK EENKLDKLVD RDLKYSFDFA ELECSVDVIL QCTQTNPILR PKMSEVLNAL EANVTLPENG IDLNREVPPY GGSCSFSVRH
601: EDPHDSSSFI IEPIELSGPR

Best Arabidopsis Sequence Match ( AT5G45780.1 )
(BLAST)

001: MEISLMKFLF LGIWVYYYSV LDSVSAMDSL LSPKGVNYEV AALMSVKNKM KDEKEVLSGW DINSVDPCTW NMVGCSSEGF VVSLEMASKG LSGILSTSIG
101: ELTHLHTLLL QNNQLTGPIP SELGQLSELE TLDLSGNRFS GEIPASLGFL THLNYLRLSR NLLSGQVPHL VAGLSGLSFL DLSFNNLSGP TPNISAKDYR
201: IVGNAFLCGP ASQELCSDAT PVRNATGLSE KDNSKHHSLV LSFAFGIVVA FIISLMFLFF WVLWHRSRLS RSHVQQDYEF EIGHLKRFSF REIQTATSNF
301: SPKNILGQGG FGMVYKGYLP NGTVVAVKRL KDPIYTGEVQ FQTEVEMIGL AVHRNLLRLF GFCMTPEERM LVYPYMPNGS VADRLRDNYG EKPSLDWNRR
401: ISIALGAARG LVYLHEQCNP KIIHRDVKAA NILLDESFEA IVGDFGLAKL LDQRDSHVTT AVRGTIGHIA PEYLSTGQSS EKTDVFGFGV LILELITGHK
501: MIDQGNGQVR KGMILSWVRT LKAEKRFAEM VDRDLKGEFD DLVLEEVVEL ALLCTQPHPN LRPRMSQVLK VLEGLVEQCE GGYEARAPSV SRNYSNGHEE
601: QSFIIEAIEL SGPR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Source:UniProtKB/Swiss-Prot;Acc:C0LGU5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.