Factsheet for TraesCS6B01G184300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G146100.1	Wheat	plasma membrane	98.88	98.88
TraesCS6A01G156100.1	Wheat	plasma membrane	98.88	98.88
Os02t0236100-01	Rice	plasma membrane	86.42	87.26
Zm00001d036887_P001	Maize	plasma membrane	37.38	85.4
EES06565	Sorghum	plasma membrane	84.34	84.21
Zm00001d037840_P001	Maize	cytosol	49.04	83.42
Zm00001d016197_P001	Maize	vacuole	83.23	83.36
GSMUA_Achr6P00440_001	Banana	plasma membrane	64.7	67.5
KRH11043	Soybean	plasma membrane	59.58	65.67
VIT_10s0003g01490.t01	Wine grape	plasma membrane	63.26	65.56
Solyc02g072310.2.1	Tomato	plasma membrane	48.72	64.76
KRH21243	Soybean	plasma membrane	63.42	63.62
CDX77614	Canola	plasma membrane	60.22	61.4
Bra025056.1-P	Field mustard	plasma membrane	60.22	61.3
CDY39449	Canola	plasma membrane	60.06	61.14
PGSC0003DMT400073093	Potato	plasma membrane	60.86	60.96
AT5G45780.1	Thale cress	plasma membrane	59.74	60.91
TraesCS3B01G106100.1	Wheat	plasma membrane	52.72	52.22
TraesCS7B01G118100.1	Wheat	plasma membrane	52.08	52.16
TraesCS6B01G319700.1	Wheat	plasma membrane	51.76	51.84
TraesCS2B01G340700.1	Wheat	plasma membrane	46.17	46.09
TraesCS7B01G324500.1	Wheat	plasma membrane	47.44	45.98
TraesCS7B01G182300.1	Wheat	plasma membrane	45.37	45.66
TraesCS6B01G223700.3	Wheat	plasma membrane	45.69	45.54
TraesCS3B01G334400.2	Wheat	plasma membrane	41.21	42.72
TraesCS1B01G134800.1	Wheat	plasma membrane	40.58	41.3
TraesCS7B01G036100.2	Wheat	plasma membrane	38.5	39.57
TraesCS3B01G199100.1	Wheat	golgi, plasma membrane	19.01	34.2
TraesCS4B01G211800.1	Wheat	plasma membrane	31.15	33.11
TraesCS5B01G004300.1	Wheat	plasma membrane	31.15	31.66

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27001	PANTHER:PTHR27001:SF104	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G184300	EnsemblPlants:TraesCS6B01G184300.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:+:207105371..207110055

Molecular Weight (calculated)

68318.4 Da

IEP (calculated)

6.686

GRAVY (calculated)

-0.012

Length

626 amino acids

Sequence
(BLAST)

001: MARLTFAAGA GAVVVAATAW LLASAGVAAG DPPLSPKGLN YEVAALMAVK SRMRDEKGVM AGWDINSVDP CTWSMVACSP DGFVVSLQMA NNGLLGALSP
101: SIGNLSYLQT MLLQNNRISG EIPPEIGKLA NLKALDLSGN QFIGEIPNSL GQLTQLNYLR LDKNNLSGQI PIDVAKLPGL TFLDISFNNL SGTVPKIYAH
201: DYSLVGNKFL CNSSILHGCT HLNGGTNDTV SRPSNKTKNH HQLALAISLS VTCATIFVLF FVCWLNYCRW RLPFASSDQD LEMELGHLKH FSFHGLQSAT
301: DNFNSKNILG QGGFGVVYKG CLRNGTLVAV KRLKDPDVTG EVQFQTELEL IGLAVHKNLL RLYGFCMTSK ERLLVYPYMP NGSVADRLRE YHHGKPCLDW
401: SKRMQIAIGA ARGLLYLHEQ CNPKIIHRDV KAANILLDGS FEAVVGDFGL AKLLDRQDSH VTTAVRGTVG HIAPEYLSTG QSSEKTDVYG FGILLLELIT
501: GPKTLSNGHG QSQKGMIIDW VRELNEEKKL DKLVDRDLKD LFDVAELECA VDVILQCTLT NPILRPKMSE VLQALESNVT LAENGVDLNR EVLLPYGGSC
601: SFSVRHEDPH DSSSFIIEPI ELSGPR

Best Arabidopsis Sequence Match ( AT1G60800.1 )
(BLAST)

001: MEGVRFVVWR LGFLVFVWFF DISSATLSPT GVNYEVTALV AVKNELNDPY KVLENWDVNS VDPCSWRMVS CTDGYVSSLD LPSQSLSGTL SPRIGNLTYL
101: QSVVLQNNAI TGPIPETIGR LEKLQSLDLS NNSFTGEIPA SLGELKNLNY LRLNNNSLIG TCPESLSKIE GLTLVDISYN NLSGSLPKVS ARTFKVIGNA
201: LICGPKAVSN CSAVPEPLTL PQDGPDESGT RTNGHHVALA FAASFSAAFF VFFTSGMFLW WRYRRNKQIF FDVNEQYDPE VSLGHLKRYT FKELRSATNH
301: FNSKNILGRG GYGIVYKGHL NDGTLVAVKR LKDCNIAGGE VQFQTEVETI SLALHRNLLR LRGFCSSNQE RILVYPYMPN GSVASRLKDN IRGEPALDWS
401: RRKKIAVGTA RGLVYLHEQC DPKIIHRDVK AANILLDEDF EAVVGDFGLA KLLDHRDSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG
501: QKALDFGRSA HQKGVMLDWV KKLHQEGKLK QLIDKDLNDK FDRVELEEIV QVALLCTQFN PSHRPKMSEV MKMLEGDGLA ERWEATQNGT GEHQPPPLPP
601: GMVSSSPRVR YYSDYIQESS LVVEAIELSG PR

Arabidopsis Description

NIK3Protein NSP-INTERACTING KINASE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.