Factsheet for Os06t0274500-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G043030.2	Barley	plasma membrane	77.81	79.68
TraesCS7D01G212800.1	Wheat	plasma membrane	77.81	79.68
TraesCS7B01G118100.1	Wheat	plasma membrane	77.81	79.68
TraesCS7A01G211100.1	Wheat	plasma membrane	77.66	79.52
EER88222	Sorghum	plasma membrane	77.97	79.33
Zm00001d018347_P001	Maize	cytosol	9.69	77.5
Zm00001d037297_P002	Maize	plasma membrane	77.5	75.38
VIT_14s0083g00620.t01	Wine grape	plasma membrane	68.44	70.42
VIT_01s0010g01000.t01	Wine grape	plasma membrane	68.59	70.24
Zm00001d045728_P003	Maize	plasma membrane	78.59	69.09
KRH45170	Soybean	plasma membrane	66.72	68.54
GSMUA_Achr3P28140_001	Banana	plasma membrane	65.78	68.46
Solyc02g089550.2.1	Tomato	plasma membrane	66.88	68.37
KRH01456	Soybean	plasma membrane	66.41	68.22
KRG93765	Soybean	plasma membrane	66.41	68.11
Os02t0728500-01	Rice	extracellular, plasma membrane	34.22	67.59
KRH75229	Soybean	plasma membrane	65.47	67.47
KRH71075	Soybean	plasma membrane	65.31	67.31
PGSC0003DMT400019446	Potato	plasma membrane	65.16	67.15
KRH18305	Soybean	plasma membrane	65.47	67.15
Solyc05g010400.2.1	Tomato	plasma membrane	64.69	66.67
AT5G16000.1	Thale cress	plasma membrane	66.25	66.46
PGSC0003DMT400007454	Potato	plasma membrane	63.91	65.97
Solyc04g005910.2.1	Tomato	plasma membrane	63.44	65.48
Bra025145.1-P	Field mustard	plasma membrane	54.84	65.36
Bra008659.1-P	Field mustard	plasma membrane	64.53	65.14
CDX69484	Canola	plasma membrane	64.53	65.14
CDY26481	Canola	plasma membrane	64.53	64.84
PGSC0003DMT400026062	Potato	plasma membrane	67.03	64.61
CDX83534	Canola	plasma membrane	64.06	64.06
CDY48073	Canola	plasma membrane	63.91	63.91
GSMUA_Achr9P19160_001	Banana	plasma membrane	62.03	63.72
AT3G25560.3	Thale cress	plasma membrane	64.22	63.52
GSMUA_Achr9P14620_001	Banana	plasma membrane	69.06	63.05
GSMUA_Achr3P06260_001	Banana	plasma membrane	65.62	61.14
GSMUA_Achr1P09620_001	Banana	plasma membrane	65.62	59.91
GSMUA_Achr1P16110_001	Banana	plasma membrane	62.97	59.88
Os01t0171000-01	Rice	plasma membrane	58.59	59.71
GSMUA_Achr7P06010_001	Banana	plasma membrane	64.84	57.4
Os08t0442700-01	Rice	plasma membrane	59.22	55.9
CDX70667	Canola	endoplasmic reticulum, golgi	62.66	55.69
CDX78667	Canola	golgi, plasma membrane	62.66	55.46
Bra006335.1-P	Field mustard	plasma membrane	58.12	54.79
Os02t0236100-01	Rice	plasma membrane	50.0	51.61
Os08t0174700-01	Rice	plasma membrane	49.84	51.12
Os04t0457800-01	Rice	plasma membrane	49.84	50.8
Os02t0283800-01	Rice	plasma membrane	45.0	47.45
Os11t0607200-01	Rice	plasma membrane	43.44	45.72
Os06t0225300-01	Rice	plasma membrane	42.66	44.32
Os01t0247500-01	Rice	golgi, plasma membrane	18.75	34.29
Os03t0266800-01	Rice	plasma membrane	29.22	31.48
Os12t0638100-01	Rice	plasma membrane	30.62	31.21

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:4340743	ProteinID:BAB19337.1
ProteinID:BAD69166.1	ProteinID:BAF19290.1	ProteinID:BAS97218.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654
GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0034504	GO:GO:0038023	GO:GO:0040007
GO:GO:0040015	GO:GO:0046777	GO:GO:0051607	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	EnsemblPlantsGene:Os06g0274500	EnsemblPlants:Os06t0274500-01
PFAM:PF07714	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF220	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q9FP13	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00000AA100	RefSeq:XP_015643910.1	SEG:seg	:	:	:

Description

SERK-like gene 2, Somatic Embryogenesis Protein Kinase 1, bri1-associated receptor kinase 1 (BAK1) homologue 7Similar to SERK1 (Fragment). (Os06t0274500-01)

Coordinates

chr6:+:9315991..9323826

Molecular Weight (calculated)

69313.0 Da

IEP (calculated)

6.654

GRAVY (calculated)

-0.076

Length

640 amino acids

Sequence
(BLAST)

001: MEPPFFLLLL LLVVSSSSPS AALLSAKGVN NEVQALIVIK NLLKDPHGVL KSWDQNSVDP CSWAMITCSP DFLVTGLEAP SQHLSGLLSP SIGNLTNLET
101: VLLQNNNITG PIPAEIGRLE NLKTLDLSSN SFYGEIPSSV GHLESLQYLR LNNNTLSGPF PSASANLSHL VFLDLSYNNL SGPIPESLAR TYNIVGNPLI
201: CDANREQDCY GTAPMPMSYS LNGSRGGALP PAARDRGHKF AVAFGSTAGC MGLLLLAAGF LFWWRHRRNR QILFDVDEQQ IENVNLGNVK RFSFRELQAA
301: TEGFSGKNIL GKGGFGNVYR GQLPDGTLVA VKRLKDGNAA GGEAQFQTEV EMISLALHRN LLRLYGFCMT ATERLLVYPF MSNGSVASRL KAKPALEWGT
401: RRRIAVGAAR GLVYLHEQCD PKIIHRDVKA ANVLLDEACE AVVGDFGLAK LLDHRESHVT TAVRGTVGHI APEYLSTGQS SDRTDVFGFG ILLLELVTGQ
501: TALEFGKSSN HKGAMLDWVK KMQSEKKVEV LVDKGLGGGY DRVEVEEMVQ VALLCTQYLP AHRPRMSDVV RMLEGDGLAD RWEKASGHST AAADSLSHSH
601: RTSDPAPPAA DFAAAFGRCF SDLTDDSSLL VQAVELSGPR

Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)

001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR

Arabidopsis Description

NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.