Factsheet for GSMUA_Achr1P16110_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0083g00620.t01	Wine grape	plasma membrane	68.65	74.28
GSMUA_Achr3P28140_001	Banana	plasma membrane	67.16	73.5
VIT_01s0010g01000.t01	Wine grape	plasma membrane	67.76	72.96
KRH01456	Soybean	plasma membrane	66.86	72.23
KRG93765	Soybean	plasma membrane	66.57	71.79
KRH45170	Soybean	plasma membrane	66.27	71.59
GSMUA_Achr9P19160_001	Banana	plasma membrane	65.97	71.27
KRH75229	Soybean	plasma membrane	65.68	71.18
KRH18305	Soybean	plasma membrane	65.97	71.15
GSMUA_Achr7P06010_001	Banana	plasma membrane	76.23	70.95
TraesCS6D01G269400.1	Wheat	plasma membrane	65.97	70.93
TraesCS6A01G289500.1	Wheat	plasma membrane	65.68	70.83
KRH71075	Soybean	plasma membrane	65.23	70.69
EES05592	Sorghum	plasma membrane	65.68	70.61
TraesCS6B01G319700.1	Wheat	plasma membrane	65.38	70.4
Zm00001d017913_P001	Maize	plasma membrane	65.38	70.06
Zm00001d018347_P001	Maize	cytosol	8.32	70.0
Solyc02g089550.2.1	Tomato	plasma membrane	64.78	69.65
TraesCS7B01G118100.1	Wheat	plasma membrane	64.19	69.12
Bra008659.1-P	Field mustard	plasma membrane	65.08	69.09
PGSC0003DMT400007454	Potato	plasma membrane	63.6	69.03
Solyc04g005910.2.1	Tomato	plasma membrane	63.45	68.87
TraesCS7A01G211100.1	Wheat	plasma membrane	63.89	68.8
TraesCS7D01G212800.1	Wheat	plasma membrane	63.89	68.8
HORVU7Hr1G043030.2	Barley	plasma membrane	63.89	68.8
CDX69484	Canola	plasma membrane	64.78	68.77
EER88222	Sorghum	plasma membrane	64.19	68.68
CDY26481	Canola	plasma membrane	64.93	68.6
Solyc05g010400.2.1	Tomato	plasma membrane	63.15	68.44
AT5G16000.1	Thale cress	plasma membrane	64.64	68.18
PGSC0003DMT400019446	Potato	plasma membrane	62.85	68.12
GSMUA_Achr1P09620_001	Banana	plasma membrane	69.99	67.19
GSMUA_Achr9P14620_001	Banana	plasma membrane	69.54	66.76
PGSC0003DMT400026062	Potato	plasma membrane	64.78	65.66
GSMUA_Achr3P06260_001	Banana	plasma membrane	66.57	65.21
Zm00001d037297_P002	Maize	plasma membrane	62.85	64.29
HORVU6Hr1G072620.29	Barley	plasma membrane	65.68	64.06
Os06t0274500-01	Rice	extracellular	59.88	62.97
GSMUA_Achr6P08840_001	Banana	plasma membrane	56.02	62.11
GSMUA_Achr2P23200_001	Banana	plasma membrane	57.8	61.36
Zm00001d045728_P003	Maize	plasma membrane	63.6	58.79
CDX70667	Canola	endoplasmic reticulum, golgi	61.96	57.92
CDX78667	Canola	golgi, plasma membrane	61.96	57.68
GSMUA_Achr9P13420_001	Banana	golgi, plasma membrane, vacuole	55.27	57.67
Bra006335.1-P	Field mustard	plasma membrane	57.21	56.7
Os02t0728500-01	Rice	extracellular, plasma membrane	26.6	55.25
GSMUA_Achr3P04810_001	Banana	plasma membrane	52.75	54.95
GSMUA_Achr7P17210_001	Banana	cytosol	39.67	54.16
GSMUA_Achr6P00440_001	Banana	plasma membrane	46.36	52.0
GSMUA_AchrUn_...	Banana	plasma membrane	47.7	50.95
GSMUA_Achr2P14850_001	Banana	plastid	46.95	50.56
GSMUA_Achr7P11620_001	Banana	plasma membrane	47.25	49.46
GSMUA_Achr10P...	Banana	plasma membrane	45.47	48.88
GSMUA_Achr8P23480_001	Banana	plasma membrane	42.35	47.26
GSMUA_Achr10P...	Banana	mitochondrion	48.14	44.69
GSMUA_Achr2P22230_001	Banana	plasma membrane	41.16	38.26
GSMUA_Achr4P22330_001	Banana	plastid	27.93	33.81
GSMUA_Achr3P04890_001	Banana	plasma membrane	29.27	33.22
GSMUA_Achr10P...	Banana	golgi, vacuole	17.09	32.76
GSMUA_Achr4P02060_001	Banana	cytosol	23.03	31.25
GSMUA_Achr5P15040_001	Banana	plasma membrane	28.08	30.83
GSMUA_Achr5P16740_001	Banana	golgi, mitochondrion, plasma membrane, plastid	17.83	28.1

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr1G16110_001	EnsemblPlants:GSMUA_Achr1P16110_001	EnsemblPlants:GSMUA_Achr1T16110_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0S0B9	PFAM:PF00069
PFAM:PF00560	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF217	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296863B	SEG:seg	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Source:GMGC_GENE;Acc:GSMUA_Achr1G16110_001]

Coordinates

chr1:-:12083622..12088333

Molecular Weight (calculated)

74321.6 Da

IEP (calculated)

8.281

GRAVY (calculated)

0.056

Length

673 amino acids

Sequence
(BLAST)

001: MRPRKGSTLV FWSAFFFLWT IVTATLSPKG VNFEVQVLMG IKAYLVDPHG VLENWDQDSV DPCSWTMVTC SPENSVIGLA TPSQNLSGTL NPSIGNLTNL
101: QILFLQNNNL SGPVPPEIGK LSKLQTVDLS NNYFSGKIPA SVGNLNGLQY ILILLAWVEN RRLNNNSLTG AFPASLVNLS QLAFLDLSYN NISGPIPKLP
201: AKTFNYGMLI CLLLCFCSIV GNPLICPSAL KQKCFGMMPM PMSFDMNNSQ IIGTWNKFLI VQSGMLCTWL GVITSKTSIL VLGHVNYKVI LAFGSTFGSI
301: CLVCLGCGLF LWWKQSHDQQ IFFDVNDLQH EELCLGNLRR FHFRELQIAT NNFSSKNILG HGGFGNVYRG TLQDGTLVAI KRLKDGNAVG GEKQFKTEVE
401: MISLAVHRNV LRLLGLSMTA TERLLVYPYM SNGSVASRLK AKPTIDWSTR KKIALGAARG LLYLHEQCDP KIIHRDVKAA NILLDDHCKA VVGDFGLAKL
501: LDHRDSHVTT AVRGTVGHIA PEYLSTGQSS EKTDVFGFGI LLLELITGLG AVEFGKAANQ KGAMLDRVRK IHQEKKLDML VDKNLKSDYD RVELEEIIQV
601: ALLCTQHVPG HRPKMSEVVS MLEGDGLVER WEASQRMEAH KLTVPETFST RYSSNITDDS SLLAQAIELS GPR

Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)

001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR

Arabidopsis Description

NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.