Factsheet for GSMUA_Achr6P08840_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P23200_001	Banana	plasma membrane	84.84	81.23
HORVU4Hr1G029640.2	Barley	cytosol	31.8	77.51
HORVU6Hr1G074570.6	Barley	cytosol	45.14	76.11
VIT_01s0127g00230.t01	Wine grape	plasma membrane	76.94	74.6
KRH69595	Soybean	plasma membrane	75.62	73.56
KRH74566	Soybean	plasma membrane	75.29	73.35
Os01t0171000-01	Rice	plasma membrane	75.62	73.09
EES02381	Sorghum	golgi, plasma membrane, vacuole	76.11	72.87
PGSC0003DMT400019924	Potato	cytosol	72.82	72.82
Zm00001d008724_P007	Maize	plasma membrane	74.63	71.9
TraesCS3B01G106100.1	Wheat	plasma membrane	74.46	71.52
TraesCS3D01G091000.2	Wheat	plasma membrane	74.3	71.14
HORVU3Hr1G016240.5	Barley	plasma membrane	74.14	70.98
Solyc04g039730.2.1	Tomato	plasma membrane	72.49	70.63
PGSC0003DMT400035086	Potato	plasma membrane	69.03	69.83
Solyc05g005140.2.1	Tomato	plasma membrane	68.04	68.49
Zm00001d039678_P002	Maize	plasma membrane	74.3	68.13
CDY46185	Canola	golgi, plasma membrane	71.17	67.92
CDY61461	Canola	golgi, plasma membrane	70.84	67.72
HORVU7Hr1G083870.7	Barley	cytosol	22.73	67.32
AT1G60800.1	Thale cress	plasma membrane	69.85	67.09
HORVU6Hr1G093140.1	Barley	mitochondrion, plastid	29.98	66.67
Bra031479.1-P	Field mustard	endoplasmic reticulum, plasma membrane	59.47	66.36
CDY61508	Canola	cytosol	55.02	65.88
CDY44608	Canola	cytosol	54.86	65.68
GSMUA_Achr3P28140_001	Banana	plasma membrane	62.93	62.11
TraesCS3A01G091100.1	Wheat	plasma membrane	65.4	61.65
GSMUA_Achr9P19160_001	Banana	plasma membrane	59.31	57.78
GSMUA_Achr1P16110_001	Banana	plasma membrane	62.11	56.02
GSMUA_Achr3P06260_001	Banana	plasma membrane	63.1	55.75
GSMUA_Achr9P14620_001	Banana	plasma membrane	64.25	55.63
GSMUA_Achr1P09620_001	Banana	plasma membrane	63.92	55.35
GSMUA_Achr7P17210_001	Banana	cytosol	44.48	54.77
GSMUA_Achr9P13420_001	Banana	golgi, plasma membrane, vacuole	57.99	54.57
GSMUA_Achr3P04810_001	Banana	plasma membrane	57.33	53.87
GSMUA_Achr6P00440_001	Banana	plasma membrane	52.88	53.5
GSMUA_Achr7P06010_001	Banana	plasma membrane	63.26	53.11
GSMUA_AchrUn_...	Banana	plasma membrane	53.87	51.9
GSMUA_Achr2P14850_001	Banana	plastid	53.05	51.52
GSMUA_Achr10P...	Banana	plasma membrane	52.72	51.12
GSMUA_Achr7P11620_001	Banana	plasma membrane	53.54	50.54
GSMUA_Achr8P23480_001	Banana	plasma membrane	48.43	48.76
GSMUA_Achr10P...	Banana	mitochondrion	53.71	44.97
GSMUA_Achr2P22230_001	Banana	plasma membrane	48.43	40.61
GSMUA_Achr3P04890_001	Banana	plasma membrane	33.28	34.06
GSMUA_Achr4P22330_001	Banana	plastid	30.81	33.63
GSMUA_Achr10P...	Banana	golgi, vacuole	19.44	33.62
GSMUA_Achr4P02060_001	Banana	cytosol	26.52	32.46
GSMUA_Achr5P15040_001	Banana	plasma membrane	31.63	31.32
GSMUA_Achr5P16740_001	Banana	golgi, mitochondrion, plasma membrane, plastid	20.26	28.81

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G08840_001
EnsemblPlants:GSMUA_Achr6P08840_001	EnsemblPlants:GSMUA_Achr6T08840_001	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	UniProt:M0T5D3	PFAM:PF00069	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF49	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002956412
SEG:seg	:	:	:	:	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Source:GMGC_GENE;Acc:GSMUA_Achr6G08840_001]

Coordinates

chr6:+:5849762..5855691

Molecular Weight (calculated)

67510.8 Da

IEP (calculated)

7.328

GRAVY (calculated)

-0.069

Length

607 amino acids

Sequence
(BLAST)

001: MGRKALLFWT LCLVPIDFLC SSSATLSPSG INYEVVALMA IKMELHDPYN VLENWDINSV DPCSWRMVTC SADGYVSALG LPSQSLSGML SPGIGNLTNL
101: QSMLLQNNAI SGSIPAEIGK LEKLQMLDLS NNQFRGTIPS LLGDLKNLNY LRLNNNSLSG PCPDTLSNII GLTLVDLSYN NLSGSLPKIS ARTFNIIGNP
201: QMCGSVSKTQ SQLGGSKSRC AAVIVGASVG SVSLLVTVIG LLLWWRHRLK QHIFFDVNDQ CDSEVCWGHL KWYSFKELRI ATNNFNSKNI LGKGGYGIVY
301: KGCLCDGSIV AVKRLRDYNT IRGIQFQTEV EMISLAVHRH LLRLCGYCTT ENERLLVYPY MANGSVASQL REHIHGRPVL DWSRRKKIAL GTARGLFYLH
401: EQCDPKIIHR DVKAANILLD EDFEAVVGDF GLAKLLDHQE SHVTTAVRGT VGHIAPEYLS TGQSSEKTDV FGFGILLLEL ITGQKALDFG RLANQKGVML
501: DWVKKLHQEN RLNIMVDKDL KNNYDRVELE EMVQVALLCT QFHPSHRPKM SEVVRMLEGD GLVESWDALQ KMDTPKCRSL ERQSPKYVDF MEDSSLVLEA
601: IELSGPR

Best Arabidopsis Sequence Match ( AT1G60800.1 )
(BLAST)

001: MEGVRFVVWR LGFLVFVWFF DISSATLSPT GVNYEVTALV AVKNELNDPY KVLENWDVNS VDPCSWRMVS CTDGYVSSLD LPSQSLSGTL SPRIGNLTYL
101: QSVVLQNNAI TGPIPETIGR LEKLQSLDLS NNSFTGEIPA SLGELKNLNY LRLNNNSLIG TCPESLSKIE GLTLVDISYN NLSGSLPKVS ARTFKVIGNA
201: LICGPKAVSN CSAVPEPLTL PQDGPDESGT RTNGHHVALA FAASFSAAFF VFFTSGMFLW WRYRRNKQIF FDVNEQYDPE VSLGHLKRYT FKELRSATNH
301: FNSKNILGRG GYGIVYKGHL NDGTLVAVKR LKDCNIAGGE VQFQTEVETI SLALHRNLLR LRGFCSSNQE RILVYPYMPN GSVASRLKDN IRGEPALDWS
401: RRKKIAVGTA RGLVYLHEQC DPKIIHRDVK AANILLDEDF EAVVGDFGLA KLLDHRDSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG
501: QKALDFGRSA HQKGVMLDWV KKLHQEGKLK QLIDKDLNDK FDRVELEEIV QVALLCTQFN PSHRPKMSEV MKMLEGDGLA ERWEATQNGT GEHQPPPLPP
601: GMVSSSPRVR YYSDYIQESS LVVEAIELSG PR

Arabidopsis Description

NIK3Protein NSP-INTERACTING KINASE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.