Factsheet for GSMUA_Achr3P28140_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0010g01000.t01	Wine grape	plasma membrane	77.89	76.64
VIT_14s0083g00620.t01	Wine grape	plasma membrane	75.94	75.08
Zm00001d018347_P001	Maize	cytosol	9.76	75.0
KRH01456	Soybean	plasma membrane	75.61	74.64
KRH45170	Soybean	plasma membrane	74.8	73.84
KRG93765	Soybean	plasma membrane	74.8	73.72
EES05592	Sorghum	plasma membrane	73.98	72.68
KRH18305	Soybean	plasma membrane	73.66	72.6
GSMUA_Achr9P19160_001	Banana	plasma membrane	73.33	72.39
TraesCS6D01G269400.1	Wheat	plasma membrane	73.5	72.2
TraesCS6A01G289500.1	Wheat	plasma membrane	73.17	72.12
TraesCS6B01G319700.1	Wheat	plasma membrane	73.17	72.0
KRH75229	Soybean	plasma membrane	72.36	71.66
Zm00001d017913_P001	Maize	plasma membrane	73.01	71.5
KRH71075	Soybean	plasma membrane	72.03	71.34
EER88222	Sorghum	plasma membrane	72.85	71.22
PGSC0003DMT400007454	Potato	plasma membrane	71.71	71.13
Solyc02g089550.2.1	Tomato	plasma membrane	72.36	71.09
Solyc04g005910.2.1	Tomato	plasma membrane	71.54	70.97
Bra008659.1-P	Field mustard	plasma membrane	73.01	70.82
AT5G16000.1	Thale cress	plasma membrane	73.01	70.38
CDX69484	Canola	plasma membrane	72.52	70.35
CDY26481	Canola	plasma membrane	72.85	70.33
Solyc05g010400.2.1	Tomato	plasma membrane	70.57	69.89
PGSC0003DMT400019446	Potato	plasma membrane	70.24	69.57
TraesCS7B01G118100.1	Wheat	plasma membrane	70.57	69.44
HORVU7Hr1G043030.2	Barley	plasma membrane	70.57	69.44
TraesCS7D01G212800.1	Wheat	plasma membrane	70.41	69.28
TraesCS7A01G211100.1	Wheat	plasma membrane	70.08	68.96
Zm00001d037297_P002	Maize	plasma membrane	72.2	67.48
GSMUA_Achr1P16110_001	Banana	plasma membrane	73.5	67.16
GSMUA_Achr1P09620_001	Banana	plasma membrane	76.1	66.76
PGSC0003DMT400026062	Potato	plasma membrane	72.03	66.72
Os06t0274500-01	Rice	extracellular	68.46	65.78
GSMUA_Achr9P14620_001	Banana	plasma membrane	74.8	65.62
HORVU6Hr1G072620.29	Barley	plasma membrane	72.68	64.78
GSMUA_Achr7P06010_001	Banana	plasma membrane	74.96	63.76
GSMUA_Achr3P06260_001	Banana	plasma membrane	70.73	63.32
GSMUA_Achr6P08840_001	Banana	plasma membrane	62.11	62.93
GSMUA_Achr2P23200_001	Banana	plasma membrane	64.06	62.15
Zm00001d045728_P003	Maize	plasma membrane	71.87	60.71
GSMUA_Achr9P13420_001	Banana	golgi, plasma membrane, vacuole	62.11	59.22
CDX70667	Canola	endoplasmic reticulum, golgi	68.94	58.89
CDX78667	Canola	golgi, plasma membrane	69.11	58.78
Bra006335.1-P	Field mustard	plasma membrane	63.74	57.73
Os02t0728500-01	Rice	extracellular, plasma membrane	30.41	57.72
GSMUA_Achr3P04810_001	Banana	plasma membrane	59.84	56.97
GSMUA_Achr7P17210_001	Banana	cytosol	44.72	55.78
GSMUA_Achr6P00440_001	Banana	plasma membrane	51.87	53.17
GSMUA_AchrUn_...	Banana	plasma membrane	53.66	52.38
GSMUA_Achr2P14850_001	Banana	plastid	52.36	51.52
GSMUA_Achr10P...	Banana	plasma membrane	51.87	50.96
GSMUA_Achr7P11620_001	Banana	plasma membrane	52.85	50.54
GSMUA_Achr8P23480_001	Banana	plasma membrane	47.15	48.09
GSMUA_Achr10P...	Banana	mitochondrion	53.17	45.1
GSMUA_Achr2P22230_001	Banana	plasma membrane	44.23	37.57
GSMUA_Achr10P...	Banana	golgi, vacuole	20.33	35.61
GSMUA_Achr4P22330_001	Banana	plastid	31.87	35.25
GSMUA_Achr3P04890_001	Banana	plasma membrane	32.52	33.73
GSMUA_Achr4P02060_001	Banana	cytosol	25.69	31.85
GSMUA_Achr5P15040_001	Banana	plasma membrane	31.54	31.65
GSMUA_Achr5P16740_001	Banana	golgi, mitochondrion, plasma membrane, plastid	20.49	29.51

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr3G28140_001	EnsemblPlants:GSMUA_Achr3P28140_001	EnsemblPlants:GSMUA_Achr3T28140_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0SII0	PFAM:PF00069
PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF217	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295392F	SEG:seg	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Source:GMGC_GENE;Acc:GSMUA_Achr3G28140_001]

Coordinates

chr3:-:27516364..27520770

Molecular Weight (calculated)

67870.7 Da

IEP (calculated)

7.144

GRAVY (calculated)

-0.088

Length

615 amino acids

Sequence
(BLAST)

001: MGTKKGRAVL HWVVFFWTLG FASALLSPKG VNFEVQALMD IKASLKDPHG VLGNWDRDSV DPCSWSMVSC SPENLVIGLE TPSQNMSGTL SPSIGNLTNL
101: EFVLLQNNYI SGSIPPEIGK LSKLHKLDLS SNHFHGEIPA SLGHLKGLQY LRLNNNSLSG AFPLALASIT ELTFLDLSFN NFSGPIPRFS ARTFSIVGNP
201: LICPTGSEQE CFNTVPVPGS LQANKISLPK SHKVIAFVSC LGCICAVSLA FGFFLWWRER HNQQILFDVN DQHNEGLCLG NLKRFHFREL QIATNNFSSK
301: NILGKGGFGN VYKGKLQDGT LVAVKRLKDG NAAGGEIQFQ TEVEMISLAV HRNLLKLWGY CMTATERLLV YPYMSNGSVA SRLKAKPTLD WSTRKRIALG
401: AARGLLYLHE QCDPKIIHRD VKAANILLDD YCEAVVGDFG LAKLLDHRDS HVTTAVRGTV GHIAPEYLST GQSSEKTDVF GFGVLLLELI TGLRALEFGK
501: AANQKSAMLD WVREVHREKL DMIVDKDLKN SYDQGELEEM VQVALLCTQY LPGDRPKMSE VVRMLEADGF AERREVSHGV AARKIEVSEF SSEHYSDLTD
601: DSSLLIQATE LSGPR

Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)

001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR

Arabidopsis Description

NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.