Factsheet for Bra006335.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78667	Canola	golgi, plasma membrane	100.0	93.91
CDX70667	Canola	endoplasmic reticulum, golgi	97.64	92.08
Bra008659.1-P	Field mustard	plasma membrane	77.32	82.81
AT5G16000.1	Thale cress	plasma membrane	76.88	81.82
VIT_14s0083g00620.t01	Wine grape	plasma membrane	64.8	70.74
KRH45170	Soybean	plasma membrane	64.51	70.31
KRH01456	Soybean	plasma membrane	64.06	69.82
KRG93765	Soybean	plasma membrane	63.03	68.59
KRH18305	Soybean	plasma membrane	62.59	68.11
Solyc02g089550.2.1	Tomato	plasma membrane	62.74	68.05
Bra025145.1-P	Field mustard	plasma membrane	52.28	66.11
TraesCS6D01G269400.1	Wheat	plasma membrane	59.06	64.06
TraesCS6A01G289500.1	Wheat	plasma membrane	58.76	63.94
PGSC0003DMT400026062	Potato	plasma membrane	62.44	63.86
TraesCS6B01G319700.1	Wheat	plasma membrane	58.76	63.84
GSMUA_Achr3P28140_001	Banana	plasma membrane	57.73	63.74
EER88222	Sorghum	plasma membrane	58.62	63.27
EES05592	Sorghum	plasma membrane	57.88	62.78
TraesCS7D01G212800.1	Wheat	plasma membrane	57.58	62.56
TraesCS7A01G211100.1	Wheat	plasma membrane	57.58	62.56
TraesCS7B01G118100.1	Wheat	plasma membrane	57.44	62.4
Zm00001d017913_P001	Maize	plasma membrane	57.29	61.94
HORVU7Hr1G043030.2	Barley	plasma membrane	56.7	61.6
GSMUA_Achr9P19160_001	Banana	plasma membrane	55.82	60.83
Zm00001d037297_P002	Maize	plasma membrane	57.73	59.57
Os06t0274500-01	Rice	extracellular	54.79	58.12
GSMUA_Achr9P14620_001	Banana	plasma membrane	59.94	58.06
HORVU6Hr1G072620.29	Barley	plasma membrane	58.62	57.68
GSMUA_Achr1P16110_001	Banana	plasma membrane	56.7	57.21
GSMUA_Achr1P09620_001	Banana	plasma membrane	58.62	56.78
GSMUA_Achr3P06260_001	Banana	plasma membrane	57.44	56.77
Bra031479.1-P	Field mustard	endoplasmic reticulum, plasma membrane	43.74	54.6
Bra024069.1-P	Field mustard	plasma membrane	50.81	54.25
Bra032133.1-P	Field mustard	plasma membrane	50.66	54.0
GSMUA_Achr7P06010_001	Banana	plasma membrane	57.14	53.67
Zm00001d045728_P003	Maize	plasma membrane	57.14	53.3
Bra032128.1-P	Field mustard	cytosol	38.0	52.98
Zm00001d018347_P001	Maize	cytosol	6.04	51.25
Bra037006.1-P	Field mustard	mitochondrion	35.79	50.73
Bra003911.1-P	Field mustard	plasma membrane	42.56	50.61
Bra032125.1-P	Field mustard	plasma membrane	39.91	50.47
Bra034562.1-P	Field mustard	plasma membrane	41.09	49.29
Bra011439.1-P	Field mustard	plasma membrane	37.56	49.04
Bra041056.1-P	Field mustard	plasma membrane	36.97	48.55
Bra025056.1-P	Field mustard	plasma membrane	42.86	47.32
Bra016112.1-P	Field mustard	plasma membrane	41.83	46.79
Bra024369.1-P	Field mustard	plasma membrane	38.29	46.26
Os02t0728500-01	Rice	extracellular, plasma membrane	21.65	45.37
Bra028592.1-P	Field mustard	plasma membrane	40.5	45.01
Bra011200.1-P	Field mustard	plastid	35.05	44.4
Bra013136.1-P	Field mustard	plasma membrane	36.97	43.43
Bra038656.1-P	Field mustard	cytosol	34.76	40.76
Bra035044.1-P	Field mustard	plasma membrane, vacuole	18.41	35.61
Bra005319.1-P	Field mustard	plasma membrane	23.27	32.24
Bra010115.1-P	Field mustard	plasma membrane	26.07	30.31
Bra023017.1-P	Field mustard	plasma membrane	23.86	30.06
Bra017307.1-P	Field mustard	plasma membrane	25.33	29.25
Bra035884.1-P	Field mustard	plasma membrane	25.04	28.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.30.930.10	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra006335
EnsemblPlants:Bra006335.1	EnsemblPlants:Bra006335.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	UniProt:M4CQ46	PFAM:PF00069	PFAM:PF08263	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF220	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF55681	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI000253F58E	SEG:seg	:	:	:

Description

AT5G16000 (E=2e-231) NIK1 | NIK1 (NSP-INTERACTING KINASE 1); kinase

Coordinates

chrA03:+:3069286..3072765

Molecular Weight (calculated)

75387.2 Da

IEP (calculated)

6.694

GRAVY (calculated)

-0.056

Length

679 amino acids

Sequence
(BLAST)

001: MRSSTIVMMM RRSLVYLLGF LYLLTSVNGL LSSNGVNFEV QALMDIKASL HDPHGVLDSW DRDAVDPCSW TMVTCSSENF VIGLLLQNNN ITGKIPSEFG
101: RLTRLETLDL SDNFFLGEVP FSLGYLRSLQ YMRLNNNSLS GVIPLSLSNM TQLALLIVGN PLICPTGKEP DCNGTTLIPM SMNLNDTGAP LYTGRSKNHK
201: MAIAVGASVG TVSMIFIAVG LFLWWRQRNN QNTFFDVKDG HYHEEVSLGN LRRFGFRELQ IATNNFSSKN LLGKGGYGNV YKGILGDNTV VAVKRLKDGN
301: ALGGEIQFQT EVEMISLAVH RNLLRLYGFC ITQAEKLLVY PYMSNGSVAS RMKAKPVLDW SIRKKIAIGA ARGLVYLHEQ CDPKIIHRDV KAANILLDDY
401: CEAVVGDFGL AKLLDHQDSH VTTAVRGTVG HIAPEYLSTG QSSEKTDVFG FGILLLELVT GQRALEFGKA ANQKGAMLEW VKKIHQEKNL EVLVDKQLLK
501: NKSYDEIELE EMVRVALLCT QYLPGHRPKM SEVVRMLEGD GLAERWEASQ RSDSGSKYSN RIFEISDVTL LDETKDLGAS NRRHLAALYC GATSGFELVH
601: GLVDRIMEVM GVPFLPNGDK TGYHINRSEE PEFLPVGQAS IIYKGKHIGN FGIVHPQVLN NFDITDPCSF VEIDIEAFL

Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)

001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR

Arabidopsis Description

NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.