Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26481 | Canola | plasma membrane | 90.75 | 90.89 |
| CDX69484 | Canola | plasma membrane | 89.97 | 90.54 |
| Bra008659.1-P | Field mustard | plasma membrane | 89.81 | 90.38 |
| VIT_14s0083g00620.t01 | Wine grape | plasma membrane | 77.9 | 79.9 |
| KRH01456 | Soybean | plasma membrane | 77.27 | 79.13 |
| KRH45170 | Soybean | plasma membrane | 77.12 | 78.97 |
| CDX70667 | Canola | endoplasmic reticulum, golgi | 88.4 | 78.33 |
| KRG93765 | Soybean | plasma membrane | 76.49 | 78.21 |
| CDX78667 | Canola | golgi, plasma membrane | 88.56 | 78.15 |
| KRH18305 | Soybean | plasma membrane | 75.86 | 77.56 |
| Bra006335.1-P | Field mustard | plasma membrane | 81.82 | 76.88 |
| Solyc02g089550.2.1 | Tomato | plasma membrane | 75.24 | 76.68 |
| Zm00001d018347_P001 | Maize | cytosol | 9.25 | 73.75 |
| GSMUA_Achr3P28140_001 | Banana | plasma membrane | 70.38 | 73.01 |
| TraesCS6D01G269400.1 | Wheat | plasma membrane | 71.47 | 72.84 |
| TraesCS6A01G289500.1 | Wheat | plasma membrane | 71.16 | 72.76 |
| TraesCS6B01G319700.1 | Wheat | plasma membrane | 71.0 | 72.48 |
| PGSC0003DMT400026062 | Potato | plasma membrane | 74.92 | 71.99 |
| EER88222 | Sorghum | plasma membrane | 70.22 | 71.22 |
| EES05592 | Sorghum | plasma membrane | 69.75 | 71.09 |
| Zm00001d017913_P001 | Maize | plasma membrane | 69.28 | 70.38 |
| TraesCS7D01G212800.1 | Wheat | plasma membrane | 68.5 | 69.92 |
| TraesCS7B01G118100.1 | Wheat | plasma membrane | 68.34 | 69.76 |
| TraesCS7A01G211100.1 | Wheat | plasma membrane | 68.34 | 69.76 |
| HORVU7Hr1G043030.2 | Barley | plasma membrane | 68.18 | 69.6 |
| GSMUA_Achr9P19160_001 | Banana | plasma membrane | 67.87 | 69.5 |
| AT3G25560.3 | Thale cress | plasma membrane | 69.75 | 68.78 |
| Zm00001d037297_P002 | Maize | plasma membrane | 69.75 | 67.63 |
| GSMUA_Achr9P14620_001 | Banana | plasma membrane | 73.2 | 66.62 |
| Os06t0274500-01 | Rice | extracellular | 66.46 | 66.25 |
| GSMUA_Achr3P06260_001 | Banana | plasma membrane | 71.16 | 66.08 |
| HORVU6Hr1G072620.29 | Barley | plasma membrane | 71.16 | 65.8 |
| GSMUA_Achr1P16110_001 | Banana | plasma membrane | 68.18 | 64.64 |
| GSMUA_Achr1P09620_001 | Banana | plasma membrane | 70.38 | 64.05 |
| AT2G23950.1 | Thale cress | plasma membrane | 60.81 | 61.2 |
| GSMUA_Achr7P06010_001 | Banana | plasma membrane | 68.5 | 60.44 |
| Zm00001d045728_P003 | Maize | plasma membrane | 68.97 | 60.44 |
| AT4G30520.1 | Thale cress | plasma membrane | 60.5 | 59.57 |
| AT1G60800.1 | Thale cress | plasma membrane | 58.46 | 59.02 |
| Os02t0728500-01 | Rice | extracellular, plasma membrane | 29.47 | 58.02 |
| AT1G71830.1 | Thale cress | plasma membrane | 52.04 | 53.12 |
| AT5G45780.1 | Thale cress | plasma membrane | 50.94 | 52.93 |
| AT1G34210.1 | Thale cress | plasma membrane | 52.04 | 52.87 |
| AT2G13790.1 | Thale cress | plasma membrane | 49.37 | 50.81 |
| AT2G13800.3 | Thale cress | plasma membrane | 47.65 | 50.58 |
| AT4G33430.2 | Thale cress | plasma membrane | 50.16 | 48.34 |
| AT5G10290.1 | Thale cress | plasma membrane | 46.08 | 47.96 |
| AT5G65240.2 | Thale cress | plasma membrane | 45.3 | 45.16 |
| AT5G63710.3 | Thale cress | plasma membrane | 41.07 | 42.6 |
| AT1G78530.1 | Thale cress | plasma membrane, vacuole | 19.75 | 35.49 |
| AT2G35620.3 | Thale cress | plasma membrane | 30.41 | 32.94 |
| AT1G31420.3 | Thale cress | plasma membrane | 30.41 | 32.77 |
| AT5G62710.1 | Thale cress | plasma membrane | 30.09 | 31.79 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.2 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:831457 | ProteinID:AED92233.1 |
| ArrayExpress:AT5G16000 | EnsemblPlantsGene:AT5G16000 | RefSeq:AT5G16000 | TAIR:AT5G16000 | RefSeq:AT5G16000-TAIR-G | EnsemblPlants:AT5G16000.1 |
| TAIR:AT5G16000.1 | EMBL:AY074263 | EMBL:AY088040 | Unigene:At.31725 | EMBL:BT002366 | ProteinID:CAC01799.1 |
| EMBL:FJ708777 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0004675 | GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005737 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007166 | GO:GO:0007178 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016032 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0034504 | GO:GO:0038023 | GO:GO:0040007 | GO:GO:0040015 |
| GO:GO:0046777 | GO:GO:0051607 | InterPro:IPR000719 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ |
| InterPro:LRR_dom_sf | Symbol:NIK1 | RefSeq:NP_197104.1 | PFAM:PF00069 | PFAM:PF08263 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF220 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | UniProt:Q9LFS4 | SMART:SM00220 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000048B4B | SEG:seg | : | : |
Description
NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
Coordinates
chr5:+:5223934..5227288
Molecular Weight (calculated)
70550.3 Da
IEP (calculated)
7.210
GRAVY (calculated)
-0.054
Length
638 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.